myRT

myRT report for GCA_002265525.1_ASM226552v1

Download annotations/find similar RTs

Seq: NOVA01000037.1 Klebsiella pneumoniae strain QJJ36 QJJ_36_S109_L004_R1_001__paired__contig_37, whole genome shotgun sequence (13711 bp)
Overview 1 RT 1: 7206-10934 bp Neighborhood of RT #1 [7206, 10934] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7206-7628 bp Feature: domain Description: DUF1380 Location: 7209-7503 bp Feature: domain Description: DUF1 380 Location: 7209-7503 bp Feature: gene Location: 7625-7816 bp Feature: gene Location: 8130-9797 bp Feature: RT Description: RVT_N Location: 8178-8415 bp Feature: RT Description: RVT_N Location: 81 78-841 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8466-9108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8466-91 08 bp Feature: domain Description: GIIM Note: maturase Location: 9159-9393 bp Feature: domain Description: GIIM Note: maturase Location: 91 59-9393 bp Feature: domain Description: HNHc Note: nucleases Location: 9603-9762 bp Feature: domain Description: HNHc Note: nucleases Location: 9603-9762 bp Feature: gene Location: 10534-10709 bp Feature: gene Location: 10677-10934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NOVA01000060.1 Klebsiella pneumoniae strain QJJ36 QJJ_36_S109_L004_R1_001__paired__contig_62, whole genome shotgun sequence (1945 bp)
Overview 1 RT 1: 152-1495 bp Neighborhood of RT #1 [152, 1887] RVT-GII Feature: gene Location: 152-403 bp Feature: gene Location: 403-1887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NOVA01000046.1 Klebsiella pneumoniae strain QJJ36 QJJ_36_S109_L004_R1_001__paired__contig_47, whole genome shotgun sequence (264092 bp)
Overview 1 RT 1: 240430-246162 bp Neighborhood of RT #1 [240430, 246692] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 240430-240660 bp Feature: gene Location: 241539-243815 bp Feature: domain Description: AAA_15 Location: 241572-242580 bp Feature: domain Description: AAA_15 Location: 241572-242580 bp Feature: gene Location: 243930-245030 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 244113-244641 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 244113 -244641 bp Feature: gene Location: 245277-245519 bp Feature: gene Location: 245589-246692 bp Feature: domain Description: STKc_PknB_like Location: 245721-246162 bp Feature: domain Description: STKc_PknB_like Location: 245721-246162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)