myRT

myRT report for GCA_002265565.1_ASM226556v1

Download annotations/find similar RTs

Seq: NOVC01000055.1 Klebsiella pneumoniae strain QJJ51 QJJ_51_3_S111_L004_R1_001__paired__contig_57, whole genome shotgun sequence (13890 bp)
Overview 1 RT 1: 2893-6496 bp Neighborhood of RT #1 [2893, 6621] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2893-3150 bp Feature: gene Location: 3118-3293 bp Feature: gene Location: 4030-5697 bp Feature: RT Description: RVT_N Location: 4078-4315 bp Feature: RT Description: RVT_N Location: 4078-431 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4366-5008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4366-5008 bp Feature: domain Description: GIIM Note: maturase Location: 5059-5293 bp Feature: domain Description: GIIM Note: maturase Location: 5059-5293 bp Feature: domain Description: HNHc Note: nucleases Location: 5503-5662 bp Feature: domain Description: HNHc Note: nucleases Location: 5503-5662 bp Feature: gene Location: 6011-6202 bp Feature: gene Location: 6199-6621 bp Feature: domain Description: DUF1380 Location: 6202-6496 bp Feature: domain Description: DUF1 380 Location: 6202-6496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: NOVC01000056.1 Klebsiella pneumoniae strain QJJ51 QJJ_51_3_S111_L004_R1_001__paired__contig_58, whole genome shotgun sequence (1943 bp)
Overview 1 RT 1: 149-1492 bp Neighborhood of RT #1 [149, 1884] RVT-GII Feature: gene Location: 149-400 bp Feature: gene Location: 400-1884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802-1492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802 -1492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NOVC01000010.1 Klebsiella pneumoniae strain QJJ51 QJJ_51_3_S111_L004_R1_001__paired__contig_10, whole genome shotgun sequence (264122 bp)
Overview 1 RT 1: 17401-23663 bp Neighborhood of RT #1 [17401, 23663] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17401-18504 bp Feature: domain Description: STKc_PknB_like Location: 17533-17974 bp Feature: domain Description: STKc_PknB_like Location: 1753 3 -17974 bp Feature: gene Location: 18574-18816 bp Feature: gene Location: 19063-20163 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19246-19774 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19246-19774 bp Feature: gene Location: 20278-22554 bp Feature: domain Description: AAA_15 Location: 20311-21319 bp Feature: domain Description: AAA_15 Location: 203 11-213 19 bp Feature: gene Location: 23433-23663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)