myRT

myRT report for GCA_002265605.1_ASM226560v1

Download annotations/find similar RTs

Seq: NOVB01000056.1 Klebsiella pneumoniae strain QJJ49 QJJ_49_S110_L004_R1_001__paired__contig_57, whole genome shotgun sequence (2004 bp)
Overview 1 RT 1: 211-1554 bp Neighborhood of RT #1 [211, 1946] RVT-GII Feature: gene Location: 211-462 bp Feature: gene Location: 462-1946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1 554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NOVB01000073.1 Klebsiella pneumoniae strain QJJ49 QJJ_49_S110_L004_R1_001__paired__contig_80, whole genome shotgun sequence (13709 bp)
Overview 1 RT 1: 2777-6380 bp Neighborhood of RT #1 [2777, 6505] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2777-3034 bp Feature: gene Location: 3002-3177 bp Feature: gene Location: 3914-5581 bp Feature: RT Description: RVT_N Location: 3962-4199 bp Feature: RT Description: RVT_N Location: 3962 -4199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4250-4892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 50-4892 bp Feature: domain Description: GIIM Note: maturase Location: 4943-5177 bp Feature: domain Description: GIIM Note: maturase Location: 4943-5177 bp Feature: domain Description: HNHc Note: nucleases Location: 5387-5546 bp Feature: domain Description: HNHc Note: nucleases Location: 5387-5546 bp Feature: gene Location: 5895-6086 bp Feature: gene Location: 6083-6505 bp Feature: domain Description: DUF1380 Location: 6086-6380 bp Feature: domain Description: DUF1380 Location: 6086-6380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: NOVB01000024.1 Klebsiella pneumoniae strain QJJ49 QJJ_49_S110_L004_R1_001__paired__contig_24, whole genome shotgun sequence (264067 bp)
Overview 1 RT 1: 17494-23756 bp Neighborhood of RT #1 [17494, 23756] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17494-18597 bp Feature: domain Description: STKc_PknB_like Location: 17626-18067 bp Feature: domain Description: STKc_PknB_like Location: 17626-18067 bp Feature: gene Location: 18667-18909 bp Feature: gene Location: 19156-20256 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19339-19867 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 193 3 9-19867 bp Feature: gene Location: 20371-22647 bp Feature: domain Description: AAA_15 Location: 20404-21412 bp Feature: domain Description: AAA_15 Location: 20404-21412 bp Feature: gene Location: 23526-23756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)