myRT

myRT report for GCA_002269075.1_ASM226907v1

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Seq: NQKF01000047.1 Pseudomonas lundensis strain L1817 Pseudomonas_lundensis_L1817_Contig47, whole genome shotgun sequence (24735 bp)
Overview 1 RT 1: 8778-13160 bp Neighborhood of RT #1 [8778, 13160] RVT-Retrons SR_Res_par Feature: gene Location: 8778-9014 bp Feature: gene Location: 9483-10337 bp Feature: gene Location: 10843-11793 bp Ori: OZY48558.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10957-11491 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0957-1 1 491 bp Feature: gene Location: 11907-12533 bp Ori: OZY48559.1 Feature: domain Description: SR_Res_par Location: 11919-12339 bp Feature: domain Description: SR_Res_par Location: 1 1 91 9-1 2339 bp Feature: gene Location: 12807-13160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, SR_Res_par (cd03767)

Seq: NQKF01000029.1 Pseudomonas lundensis strain L1817 Pseudomonas_lundensis_L1817_Contig29, whole genome shotgun sequence (56835 bp)
Overview 1 RT 1: 19729-26880 bp Neighborhood of RT #1 [19729, 26933] AAA_21 RVT-G2L4 LysR ALDH_F6_MMSDH Feature: gene Location: 19729-21174 bp Ori: OZY49221.1 Feature: domain Description: AAA_21 Location: 19861-20548 bp Feature: domain Description: AAA_2 1 Location: 19861-2 0548 bp Feature: gene Location: 21406-22011 bp Feature: gene Location: 22210-23457 bp Ori: OZY49223.1 Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 22429-23017 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 2 42 9-2 3017 bp Feature: gene Location: 24329-25309 bp Ori: OZY49224.1 Feature: domain Description: LysR Location: 24365-25217 bp Feature: domain Description: LysR Location: 2 4365-2 52 17 bp Feature: gene Location: 25422-26933 bp Ori: OZY49225.1 Gene: mmsA Feature: domain Description: ALDH_F6_MMSDH Location: 25455-26880 bp Feature: domain Description: ALDH_F6_MMSDH Location: 2 5455-2 6880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-G2L4, LysR (COG0583), ALDH_F6_MMSDH (cd07085)