myRT

myRT report for GCA_002269735.1_ASM226973v1

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Seq: MJIO01000028.1 Escherichia coli 102712 102712_28, whole genome shotgun sequence (134636 bp)
Overview 1 RT 1: 92596-96756 bp Neighborhood of RT #1 [92596, 96756] TIGR02646 COG3950 RVT-Retrons DinI Feature: gene Location: 92596-93156 bp Feature: domain Description: TIGR02646 Location: 92599-92947 bp Feature: domain Description: TIGR02646 Location: 92599-92947 bp Feature: gene Location: 93276-94910 bp Feature: domain Description: COG3950 Location: 93414-94872 bp Feature: domain Description: COG3950 Location: 9341 4-94872 bp Feature: gene Location: 94910-95845 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95012-95606 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9501 2-95606 bp Feature: gene Location: 96324-96557 bp Feature: domain Description: DinI Location: 96366-96552 bp Feature: domain Description: DinI Location: 96366-96552 bp Feature: gene Location: 96568-96756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, DinI (pfam06183)

Seq: MJIO01000052.1 Escherichia coli 102712 102712_52, whole genome shotgun sequence (17275 bp)
Overview 1 RT 1: 5026-8665 bp Neighborhood of RT #1 [5026, 8832] InsE PHA02517 RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 5026-5328 bp Feature: domain Description: InsE Location: 5065-5314 bp Feature: domain Description: InsE Location: 5065-5314 bp Feature: gene Location: 5384-5809 bp Feature: domain Description: PHA02517 Location: 5408-5744 bp Feature: domain Description: PHA02 517 Location: 5408-5744 bp Feature: gene Location: 6401-7924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6674-7406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6674-7406 bp Feature: domain Description: GIIM Note: maturase Location: 7481-7679 bp Feature: domain Description: GIIM Note: maturase Location: 7481-7679 bp Feature: gene Location: 8077-8253 bp Feature: domain Description: PHA02517 Location: 8080-8182 bp Feature: domain Description: PHA02 517 Location: 8080-8182 bp Feature: gene Location: 8419-8832 bp Feature: domain Description: COG2085 Location: 8518-8665 bp Feature: domain Description: COG2 085 Location: 8518-8665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )