myRT

myRT report for GCA_002269905.1_ASM226990v1

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Seq: NIAU01000320.1 Klebsiella pneumoniae strain A5 Klebsiella_pneumoniae_A5_contig_123, whole genome shotgun sequence (13937 bp)
Overview 1 RT 1: 6008-9192 bp Neighborhood of RT #1 [6008, 9192] PRK10276 RVT-GII Feature: gene Location: 6008-6433 bp Ori: PAB11963.1 Feature: domain Description: PRK10276 Location: 6011-6419 bp Feature: domain Description: PRK1 0276 Location: 601 1 -641 9 bp Feature: gene Location: 6587-6838 bp Feature: gene Location: 6838-8346 bp Ori: PAB11965.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7240-7954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7240-7954 bp Feature: gene Location: 8580-8810 bp Feature: gene Location: 8980-9192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NIAU01000242.1 Klebsiella pneumoniae strain A5 Klebsiella_pneumoniae_A5_contig_38, whole genome shotgun sequence (53568 bp)
Overview 1 RT 1: 37805-41744 bp Neighborhood of RT #1 [37805, 41952] Psu RVT-UG17 SLATT_5 PRK09692 PRK09692 Feature: gene Location: 37805-38354 bp Feature: domain Description: Psu Location: 37823-38204 bp Feature: domain Description: Psu Location: 3782 3-382 04 bp Feature: gene Location: 38364-38499 bp Feature: gene Location: 38681-40090 bp Ori: PAB15080.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38918-39530 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38918-39530 bp Feature: gene Location: 40285-40926 bp Ori: PAB15089.1 Feature: domain Description: SLATT_5 Location: 40288-40891 bp Feature: domain Description: SLATT_5 Location: 402 88-40891 bp Feature: gene Location: 40979-41952 bp Feature: domain Description: PRK09692 Location: 40988-41351 bp Feature: domain Description: PRK09692 Location: 40988-41351 bp Feature: domain Description: PRK09692 Location: 41372-41744 bp Feature: domain Description: PRK09692 Location: 41372 -41744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional)

Seq: NIAU01000232.1 Klebsiella pneumoniae strain A5 Klebsiella_pneumoniae_A5_contig_86, whole genome shotgun sequence (14784 bp)
Overview 1 RT 1: 2699-7436 bp Neighborhood of RT #1 [2699, 7436] DUF4756 RVT-Retrons Feature: gene Location: 2699-3178 bp Ori: PAB15368.1 Feature: domain Description: DUF4756 Location: 2702-3173 bp Feature: domain Description: DUF4756 Location: 2702-3 173 bp Feature: gene Location: 3412-4290 bp Feature: gene Location: 4649-5518 bp Ori: PAB15380.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4745-5294 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4745-5294 bp Feature: gene Location: 5609-6478 bp Feature: gene Location: 7089-7436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4756 (pfam15948), RVT-Retrons