myRT

myRT report for GCA_002269925.1_ASM226992v1

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Seq: NIAV01000032.1 Klebsiella pneumoniae strain A2 Klebsiella_pneumoniae_A2_contig_139, whole genome shotgun sequence (10928 bp)
Overview 1 RT 1: 4478-9210 bp Neighborhood of RT #1 [4478, 9215] RVT-Retrons DUF4756 Feature: gene Location: 4478-4825 bp Feature: gene Location: 5436-6305 bp Feature: gene Location: 6396-7265 bp Ori: PAB22843.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6492-7041 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6492-7041 bp Feature: gene Location: 7624-8502 bp Feature: gene Location: 8736-9215 bp Ori: PAB22838.1 Feature: domain Description: DUF4756 Location: 8739-9210 bp Feature: domain Description: DUF4756 Location: 8739-921 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF4756 (pfam15948)

Seq: NIAV01000007.1 Klebsiella pneumoniae strain A2 Klebsiella_pneumoniae_A2_contig_6, whole genome shotgun sequence (11146 bp)
Overview 1 RT 1: 1827-4997 bp Neighborhood of RT #1 [1827, 5011] RVT-GII PRK10276 Feature: gene Location: 1827-2039 bp Feature: gene Location: 2209-2439 bp Feature: gene Location: 2673-4181 bp Ori: PAB23259.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3075-3789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3075-3789 bp Feature: gene Location: 4181-4432 bp Feature: gene Location: 4586-5011 bp Ori: PAB23261.1 Feature: domain Description: PRK10276 Location: 4589-4997 bp Feature: domain Description: PRK102 76 Location: 4589-4997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NIAV01000070.1 Klebsiella pneumoniae strain A2 Klebsiella_pneumoniae_A2_contig_11, whole genome shotgun sequence (146140 bp)
Overview 1 RT 1: 130887-134884 bp Neighborhood of RT #1 [130887, 135034] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu Feature: gene Location: 130887-131860 bp Feature: domain Description: PRK09692 Location: 130896-131259 bp Feature: domain Description: PRK09692 Location: 13 0896-13 1259 bp Feature: domain Description: PRK09692 Location: 131280-131652 bp Feature: domain Description: PRK09692 Location: 13 1280-13 1652 bp Feature: gene Location: 131913-132554 bp Ori: PAB21728.1 Feature: domain Description: SLATT_5 Location: 131916-132519 bp Feature: domain Description: SLATT_5 Location: 13 1916-13 2519 bp Feature: gene Location: 132749-134158 bp Ori: PAB21705.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 132986-133598 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 13 2986-13 3 598 bp Feature: gene Location: 134340-134475 bp Feature: gene Location: 134485-135034 bp Feature: domain Description: Psu Location: 134503-134884 bp Feature: domain Description: Psu Location: 13 4503 -13 4884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455)