myRT

myRT report for GCA_002270125.1_ASM227012v1

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Seq: NIFV01000439.1 Escherichia coli strain SZH29-1 SZH29-1_S26_L001_R1_001__paired__contig_442, whole genome shotgun sequence (10992 bp)
Overview 1 RT 1: 7491-10654 bp Neighborhood of RT #1 [7491, 10671] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 7491-7967 bp Ori: PAC05559.1 Feature: domain Description: PRK10724 Location: 7497-7965 bp Feature: domain Description: PRK1 0724 Location: 7497-7965 bp Feature: gene Location: 8099-8589 bp Feature: domain Description: SmpB Location: 8129-8261 bp Feature: domain Description: SmpB Location: 81 29-8261 bp Feature: gene Location: 9275-10048 bp Ori: PAC05560.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 9410-9863 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 941 0-9863 bp Feature: gene Location: 10017-10205 bp Feature: gene Location: 10453-10671 bp Ori: PAC05562.1 Feature: domain Description: PRK09678 Location: 10456-10654 bp Feature: domain Description: PRK09678 Location: 1 0456-1 0654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: NIFV01000497.1 Escherichia coli strain SZH29-1 SZH29-1_S26_L001_R1_001__paired__contig_500, whole genome shotgun sequence (8725 bp)
Overview 1 RT 1: 4291-6612 bp Neighborhood of RT #1 [4291, 6612] HTH_XRE RVT-Retrons Feature: gene Location: 4291-4584 bp Feature: gene Location: 4621-4929 bp Ori: PAC04275.1 Feature: domain Description: HTH_XRE Location: 4633-4798 bp Feature: domain Description: HTH_XRE Location: 4633-4798 bp Feature: gene Location: 4907-5857 bp Ori: PAC04276.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5087-5630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5087-5630 bp Feature: gene Location: 5982-6419 bp Feature: gene Location: 6418-6612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons