myRT

myRT report for GCA_002272225.1_assembly-7894-2_v1

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Seq: NPDG01000102.1 Bacillus sp. 7894-2 contig00102, whole genome shotgun sequence (112375 bp)
Overview 1 RT 1: 51289-58838 bp Neighborhood of RT #1 [51289, 58838] Z1 HATPase_c_3 RVT-Retrons HTH_ICLR Feature: gene Location: 51289-53934 bp Feature: domain Description: Z1 Location: 52513-53200 bp Feature: domain Description: Z1 Location: 5251 3-53200 bp Feature: gene Location: 53921-55399 bp Feature: domain Description: HATPase_c_3 Location: 53990-54389 bp Feature: domain Description: HATPase_c_3 Location: 53990-54389 bp Feature: gene Location: 56354-57370 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56573-57122 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56573-571 22 bp Feature: gene Location: 57624-57941 bp Feature: domain Description: HTH_ICLR Location: 57642-57813 bp Feature: domain Description: HTH_ICLR Location: 57642-5781 3 bp Feature: gene Location: 57945-58838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Z1 (pfam10593), HATPase_c_3 (pfam13589), RVT-Retrons, HTH_ICLR (smart00346)

Seq: NPDG01000070.1 Bacillus sp. 7894-2 contig00070, whole genome shotgun sequence (30640 bp)
Overview 1 RT 1: 19160-25785 bp Neighborhood of RT #1 [19160, 25793] cls RVT-GII GIIM TldD TldD Feature: gene Location: 19160-20671 bp Feature: domain Description: cls Location: 19250-20669 bp Feature: domain Description: cls Location: 192 50-2 0669 bp Feature: gene Location: 20769-20954 bp Feature: gene Location: 21256-22515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21454-22072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1454-2 2 072 bp Feature: domain Description: GIIM Note: maturase Location: 22120-22333 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 12 0-2 2 333 bp Feature: gene Location: 23042-24433 bp Feature: domain Description: TldD Location: 23063-24416 bp Feature: domain Description: TldD Location: 2 3063-2 4416 bp Feature: gene Location: 24435-25793 bp Feature: domain Description: TldD Location: 24456-25785 bp Feature: domain Description: TldD Location: 2 4456-2 5785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cls, RVT-GII, GIIM (pfam08388), TldD (COG0312)