myRT

myRT report for GCA_002274365.1_UCI18_v1.0

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Seq: LKZJ01000141.1 Staphylococcus aureus strain UCI 18 UCI18_c4, whole genome shotgun sequence (20311 bp)
Overview 1 RT 1: 6727-12178 bp Neighborhood of RT #1 [6727, 12178] PRK08617 RVT-Retrons Feature: gene Location: 6727-8391 bp Ori: PAI26413.1 Feature: domain Description: PRK08617 Location: 6736-8383 bp Feature: domain Description: PRK0861 7 Location: 6736-8383 bp Feature: gene Location: 8885-9067 bp Feature: gene Location: 9641-10657 bp Ori: PAI26415.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9791-10328 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9791 -1 0328 bp Feature: gene Location: 10902-11531 bp Feature: gene Location: 11531-12178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: LKZJ01000120.1 Staphylococcus aureus strain UCI 18 plasmid unnamed4 UCI18_c286, whole genome shotgun sequence (20865 bp)
Overview 1 RT 1: 13460-20008 bp Neighborhood of RT #1 [13460, 20008] MecR1 Transpeptidase PenP RVT-AbiK RVT-AbiK Feature: gene Location: 13460-15217 bp Ori: PAI27341.1 Feature: domain Description: MecR1 Location: 13463-14492 bp Feature: domain Description: MecR1 Location: 13463-14492 bp Feature: domain Description: Transpeptidase Location: 14546-15191 bp Feature: domain Description: Transpeptidase Location: 14546-15191 bp Feature: gene Location: 15324-16169 bp Ori: PAI27342.1 Feature: domain Description: PenP Location: 15336-16161 bp Feature: domain Description: PenP Location: 15336-16161 bp Feature: gene Location: 16523-17614 bp Ori: PAI27343.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 16526-16706 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1652 6-16706 bp Feature: gene Location: 17701-18291 bp Ori: PAI27344.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 18175-18274 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 18175-182 74 bp Feature: gene Location: 18832-19440 bp Feature: gene Location: 19520-20008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MecR1 (COG4219), Transpeptidase (pfam00905), PenP (COG2367), RVT-AbiK