myRT

myRT report for GCA_002274385.1_UCI16_v1.0

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Seq: LKZH01000055.1 Staphylococcus aureus strain UCI 16 UCI16_c4, whole genome shotgun sequence (204880 bp)
Overview 1 RT 1: 155160-160603 bp Neighborhood of RT #1 [155160, 160611] RVT-Retrons PRK08617 Feature: gene Location: 155160-155807 bp Feature: gene Location: 155807-156436 bp Feature: gene Location: 156681-157697 bp Ori: PAI19919.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 156831-157368 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 56831 -1 57368 bp Feature: gene Location: 158271-158453 bp Feature: gene Location: 158947-160611 bp Ori: PAI19921.1 Feature: domain Description: PRK08617 Location: 158956-160603 bp Feature: domain Description: PRK0861 7 Location: 1 58956-1 60603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK08617 (acetolactate synthase AlsS)

Seq: LKZH01000023.1 Staphylococcus aureus strain UCI 16 plasmid unnamed3 UCI16_c151, whole genome shotgun sequence (19689 bp)
Overview 1 RT 1: 13413-19392 bp Neighborhood of RT #1 [13413, 19392] MecR1 Transpeptidase PenP RVT-AbiK RVT-AbiK Feature: gene Location: 13413-15170 bp Ori: PAI22314.1 Feature: domain Description: MecR1 Location: 13416-14445 bp Feature: domain Description: MecR1 Location: 13416-14445 bp Feature: domain Description: Transpeptidase Location: 14499-15144 bp Feature: domain Description: Transpeptidase Location: 14499-15144 bp Feature: gene Location: 15277-16122 bp Ori: PAI22315.1 Feature: domain Description: PenP Location: 15289-16114 bp Feature: domain Description: PenP Location: 152 89-16114 bp Feature: gene Location: 16476-17567 bp Ori: PAI22316.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 16479-16659 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 16479-16659 bp Feature: gene Location: 17654-18244 bp Ori: PAI22317.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 18128-18227 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1812 8-182 2 7 bp Feature: gene Location: 18784-19392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MecR1 (COG4219), Transpeptidase (pfam00905), PenP (COG2367), RVT-AbiK