myRT

myRT report for GCA_002274765.1_UCI58_v1.0

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Seq: LLAX01000043.1 Staphylococcus aureus strain UCI 58 UCI58_c34, whole genome shotgun sequence (129532 bp)
Overview 1 RT 1: 44232-49683 bp Neighborhood of RT #1 [44232, 49683] PRK08617 RVT-Retrons Feature: gene Location: 44232-45896 bp Ori: PAJ06441.1 Feature: domain Description: PRK08617 Location: 44241-45888 bp Feature: domain Description: PRK0861 7 Location: 44241 -45888 bp Feature: gene Location: 46390-46572 bp Feature: gene Location: 47146-48162 bp Ori: PAJ06443.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47296-47833 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47296-47833 bp Feature: gene Location: 48407-49036 bp Feature: gene Location: 49036-49683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: LLAX01000020.1 Staphylococcus aureus strain UCI 58 plasmid unnamed2 UCI58_c151, whole genome shotgun sequence (28455 bp)
Overview 1 RT 1: 3062-11116 bp Neighborhood of RT #1 [3062, 11142] REP RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 3062-3202 bp Ori: PAJ08000.1 Feature: domain Description: REP Location: 3083-3185 bp Feature: domain Description: REP Location: 3083-3185 bp Feature: gene Location: 5163-5771 bp Feature: gene Location: 6311-6901 bp Ori: PAJ08002.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 6785-6884 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 6785-6884 bp Feature: gene Location: 6988-8079 bp Ori: PAJ08003.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 6991-7171 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 6991-7171 bp Feature: gene Location: 8433-9278 bp Ori: PAJ08004.1 Feature: domain Description: PenP Location: 8445-9270 bp Feature: domain Description: PenP Location: 8445-92 70 bp Feature: gene Location: 9385-11142 bp Ori: PAJ08005.1 Feature: domain Description: MecR1 Location: 9388-10417 bp Feature: domain Description: MecR1 Location: 9388-10417 bp Feature: domain Description: Transpeptidase Location: 10471-11116 bp Feature: domain Description: Transpeptidase Location: 10471-11116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT REP (COG5655), RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)