myRT

myRT report for GCA_002274785.1_UCI60_v1.0

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Seq: LLAZ01000043.1 Staphylococcus aureus strain UCI 60 UCI60_c139, whole genome shotgun sequence (11769 bp)
Overview 1 RT 1: 5643-11094 bp Neighborhood of RT #1 [5643, 11094] PRK08617 RVT-Retrons Feature: gene Location: 5643-7307 bp Ori: PAJ16588.1 Feature: domain Description: PRK08617 Location: 5652-7299 bp Feature: domain Description: PRK0861 7 Location: 5652-7299 bp Feature: gene Location: 7801-7983 bp Feature: gene Location: 8557-9573 bp Ori: PAJ16590.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8707-9244 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8707-9244 bp Feature: gene Location: 9818-10447 bp Feature: gene Location: 10447-11094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: LLAZ01000157.1 Staphylococcus aureus strain UCI 60 plasmid unnamed5 UCI60_c369, whole genome shotgun sequence (19749 bp)
Overview 1 RT 1: 13460-19439 bp Neighborhood of RT #1 [13460, 19439] MecR1 Transpeptidase PenP RVT-AbiK RVT-AbiK Feature: gene Location: 13460-15217 bp Ori: PAJ12509.1 Feature: domain Description: MecR1 Location: 13463-14492 bp Feature: domain Description: MecR1 Location: 13463-14492 bp Feature: domain Description: Transpeptidase Location: 14546-15191 bp Feature: domain Description: Transpeptidase Location: 14546-15191 bp Feature: gene Location: 15324-16169 bp Ori: PAJ12510.1 Feature: domain Description: PenP Location: 15336-16161 bp Feature: domain Description: PenP Location: 15336-16161 bp Feature: gene Location: 16523-17614 bp Ori: PAJ12511.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 16526-16706 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1652 6-16706 bp Feature: gene Location: 17701-18291 bp Ori: PAJ12512.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 18175-18274 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 18175-182 74 bp Feature: gene Location: 18831-19439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MecR1 (COG4219), Transpeptidase (pfam00905), PenP (COG2367), RVT-AbiK