myRT

myRT report for GCA_002275505.1_UCI04_v1.0

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Seq: LKYV01000050.1 Staphylococcus aureus strain UCI 4 UCI04_c20, whole genome shotgun sequence (99177 bp)
Overview 1 RT 1: 13812-19263 bp Neighborhood of RT #1 [13812, 19263] PRK08617 RVT-Retrons Feature: gene Location: 13812-15476 bp Ori: PAJ69774.1 Feature: domain Description: PRK08617 Location: 13821-15468 bp Feature: domain Description: PRK0861 7 Location: 1 3821 -1 5468 bp Feature: gene Location: 15970-16152 bp Feature: gene Location: 16726-17742 bp Ori: PAJ69776.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16876-17413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6876-1 741 3 bp Feature: gene Location: 17987-18616 bp Feature: gene Location: 18616-19263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: LKYV01000052.1 Staphylococcus aureus strain UCI 4 plasmid unnamed2 UCI04_c214, whole genome shotgun sequence (22706 bp)
Overview 1 RT 1: 16437-22416 bp Neighborhood of RT #1 [16437, 22416] MecR1 Transpeptidase PenP RVT-AbiK RVT-AbiK Feature: gene Location: 16437-18194 bp Ori: PAJ69527.1 Feature: domain Description: MecR1 Location: 16440-17469 bp Feature: domain Description: MecR1 Location: 16440-17469 bp Feature: domain Description: Transpeptidase Location: 17523-18168 bp Feature: domain Description: Transpeptidase Location: 1752 3-18168 bp Feature: gene Location: 18301-19146 bp Ori: PAJ69528.1 Feature: domain Description: PenP Location: 18313-19138 bp Feature: domain Description: PenP Location: 18313-19138 bp Feature: gene Location: 19500-20591 bp Ori: PAJ69529.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 19503-19683 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 19503-19683 bp Feature: gene Location: 20678-21268 bp Ori: PAJ69530.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 21152-21251 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2 1152 -2 12 51 bp Feature: gene Location: 21808-22416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MecR1 (COG4219), Transpeptidase (pfam00905), PenP (COG2367), RVT-AbiK