myRT

myRT report for GCA_002275585.1_UCI15_v1.0

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Seq: LKZG01000116.1 Staphylococcus aureus strain UCI 15 UCI15_c9, whole genome shotgun sequence (27377 bp)
Overview 1 RT 1: 2787-8238 bp Neighborhood of RT #1 [2787, 8238] PRK08617 RVT-Retrons Feature: gene Location: 2787-4451 bp Ori: PAI15993.1 Feature: domain Description: PRK08617 Location: 2796-4443 bp Feature: domain Description: PRK0861 7 Location: 2796-4443 bp Feature: gene Location: 4945-5127 bp Feature: gene Location: 5701-6717 bp Ori: PAI15995.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5851-6388 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5851 -6388 bp Feature: gene Location: 6962-7591 bp Feature: gene Location: 7591-8238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: LKZG01000029.1 Staphylococcus aureus strain UCI 15 plasmid unnamed4 UCI15_c152, whole genome shotgun sequence (19808 bp)
Overview 1 RT 1: 356-6309 bp Neighborhood of RT #1 [356, 6335] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 356-964 bp Feature: gene Location: 1504-2094 bp Ori: PAI21434.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1978-2077 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1978-2 077 bp Feature: gene Location: 2181-3272 bp Ori: PAI21435.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2184-2364 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2 184-2 364 bp Feature: gene Location: 3626-4471 bp Ori: PAI21436.1 Feature: domain Description: PenP Location: 3638-4463 bp Feature: domain Description: PenP Location: 3638-4463 bp Feature: gene Location: 4578-6335 bp Ori: PAI21437.1 Feature: domain Description: MecR1 Location: 4581-5610 bp Feature: domain Description: MecR1 Location: 4581-5610 bp Feature: domain Description: Transpeptidase Location: 5664-6309 bp Feature: domain Description: Transpeptidase Location: 5664-6309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)