myRT

myRT report for GCA_002276065.1_Bp8961

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Seq: NQMZ01000037.1 Burkholderia ubonensis strain Bp8961 Contig_42, whole genome shotgun sequence (36795 bp)
Overview 1 RT 1: 1333-7334 bp Neighborhood of RT #1 [1333, 7345] DUF3141 AcrR RVT-Retrons VOC Cupin_6 AraC Feature: gene Location: 1333-3537 bp Ori: PAJ91285.1 Feature: domain Description: DUF3141 Location: 1405-3139 bp Feature: domain Description: DUF31 41 Location: 1 405-31 39 bp Feature: gene Location: 3631-4266 bp Ori: PAJ91286.1 Feature: domain Description: AcrR Location: 3748-4162 bp Feature: domain Description: AcrR Location: 3748-41 62 bp Feature: gene Location: 4043-5386 bp Ori: PAJ91287.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4508-5144 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4508-51 44 bp Feature: gene Location: 5689-6075 bp Ori: PAJ91288.1 Feature: domain Description: VOC Location: 5704-6025 bp Feature: domain Description: VOC Location: 5704-6025 bp Feature: gene Location: 6518-7345 bp Ori: PAJ91289.1 Feature: domain Description: Cupin_6 Location: 6527-6986 bp Feature: domain Description: Cupin_6 Location: 6527-6986 bp Feature: domain Description: AraC Location: 7004-7334 bp Feature: domain Description: AraC Location: 7004-7334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3141 (pfam11339), AcrR (COG1309), RVT-Retrons, VOC (cl14632), Cupin_6 (pfam12852), AraC (COG2207)

Seq: NQMZ01000012.1 Burkholderia ubonensis strain Bp8961 Contig_2, whole genome shotgun sequence (553023 bp)
Overview 1 RT 1: 264688-272600 bp Neighborhood of RT #1 [264688, 273367] VgrG COG4253 RVT-UG7 PinE ADP_ribosyl_GH Feature: gene Location: 264688-267399 bp Ori: PAJ94098.1 Feature: domain Description: VgrG Location: 264736-266497 bp Feature: domain Description: VgrG Location: 2 64736-2 66497 bp Feature: domain Description: COG4253 Location: 266512-267337 bp Feature: domain Description: COG42 53 Location: 2 66512 -2 67337 bp Feature: gene Location: 267818-268552 bp Feature: gene Location: 268533-270173 bp Ori: PAJ94100.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 268950-269367 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 68950-2 69367 bp Feature: gene Location: 270534-271133 bp Ori: PAJ94101.1 Feature: domain Description: PinE Location: 270537-271119 bp Feature: domain Description: PinE Location: 2 70537-2 71119 bp Feature: gene Location: 271541-273367 bp Ori: PAJ94102.1 Feature: domain Description: ADP_ribosyl_GH Location: 271631-272600 bp Feature: domain Description: ADP_ribosyl_GH Location: 2 71631-2 72 600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VgrG (COG3501), COG4253 (Uncharacterized conserved protein, DUF2345 family ), RVT-UG7, PinE (COG1961), ADP_ribosyl_GH (pfam03747)