myRT

myRT report for GCA_002276095.1_Bp8960

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Seq: NQNA01000016.1 Burkholderia ubonensis strain Bp8960 Contig_23, whole genome shotgun sequence (136318 bp)
Overview 1 RT 1: 89260-94414 bp Neighborhood of RT #1 [89260, 94414] Hypoth_Ymh RVT-Retrons INT_Rci_Hp1_C Feature: gene Location: 89260-89544 bp Feature: gene Location: 89642-90403 bp Feature: domain Description: Hypoth_Ymh Location: 90026-90359 bp Feature: domain Description: Hypoth_Ymh Location: 90026-90359 bp Feature: gene Location: 90548-91480 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90650-91241 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90650-91 241 bp Feature: gene Location: 92714-93844 bp Feature: domain Description: INT_Rci_Hp1_C Location: 93281-93809 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 93281 -93809 bp Feature: gene Location: 94154-94414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hypoth_Ymh (pfam09509), RVT-Retrons, INT_Rci_Hp1_C (cd00796)

Seq: NQNA01000031.1 Burkholderia ubonensis strain Bp8960 Contig_37, whole genome shotgun sequence (36770 bp)
Overview 1 RT 1: 29195-34809 bp Neighborhood of RT #1 [29195, 35207] Cupin_6 AraC VOC RVT-Retrons AcrR DUF3141 Feature: gene Location: 29195-30022 bp Feature: domain Description: Cupin_6 Location: 29204-29663 bp Feature: domain Description: Cupin_6 Location: 2 92 04-2 9663 bp Feature: domain Description: AraC Location: 29681-30011 bp Feature: domain Description: AraC Location: 2 9681-30011 bp Feature: gene Location: 30465-30851 bp Feature: domain Description: VOC Location: 30480-30801 bp Feature: domain Description: VOC Location: 30480-30801 bp Feature: gene Location: 31154-32497 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31619-32255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31619-32 2 55 bp Feature: gene Location: 32274-32909 bp Feature: domain Description: AcrR Location: 32391-32805 bp Feature: domain Description: AcrR Location: 32 391-32 805 bp Feature: gene Location: 33003-35207 bp Feature: domain Description: DUF3141 Location: 33075-34809 bp Feature: domain Description: DUF3141 Location: 33075-34809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cupin_6 (pfam12852), AraC (COG2207), VOC (cl14632), RVT-Retrons, AcrR (COG1309), DUF3141 (pfam11339)