myRT

myRT report for GCA_002276105.1_Bp8958

Download annotations/find similar RTs

Seq: NQNB01000001.1 Burkholderia ubonensis strain Bp8958 Contig_1, whole genome shotgun sequence (604817 bp)
Overview 1 RT 1: 500343-508255 bp Neighborhood of RT #1 [500343, 509022] VgrG COG4253 RVT-UG7 PinE ADP_ribosyl_GH Feature: gene Location: 500343-503054 bp Ori: PAK09897.1 Feature: domain Description: VgrG Location: 500391-502152 bp Feature: domain Description: VgrG Location: 500391 -5021 52 bp Feature: domain Description: COG4253 Location: 502167-502992 bp Feature: domain Description: COG4253 Location: 5021 67-502992 bp Feature: gene Location: 503473-504207 bp Feature: gene Location: 504188-505828 bp Ori: PAK09899.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 504605-505022 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 504605-505022 bp Feature: gene Location: 506189-506788 bp Ori: PAK09900.1 Feature: domain Description: PinE Location: 506192-506774 bp Feature: domain Description: PinE Location: 5061 92-506774 bp Feature: gene Location: 507196-509022 bp Ori: PAK09901.1 Feature: domain Description: ADP_ribosyl_GH Location: 507286-508255 bp Feature: domain Description: ADP_ribosyl_GH Location: 507286-508255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VgrG (COG3501), COG4253 (Uncharacterized conserved protein, DUF2345 family ), RVT-UG7, PinE (COG1961), ADP_ribosyl_GH (pfam03747)

Seq: NQNB01000038.1 Burkholderia ubonensis strain Bp8958 Contig_43, whole genome shotgun sequence (36391 bp)
Overview 1 RT 1: 29226-34840 bp Neighborhood of RT #1 [29226, 35238] Cupin_6 AraC VOC RVT-Retrons AcrR DUF3141 Feature: gene Location: 29226-30053 bp Ori: PAK04576.1 Feature: domain Description: Cupin_6 Location: 29235-29694 bp Feature: domain Description: Cupin_6 Location: 2 92 35-2 9694 bp Feature: domain Description: AraC Location: 29712-30042 bp Feature: domain Description: AraC Location: 2 9712 -30042 bp Feature: gene Location: 30496-30882 bp Ori: PAK04577.1 Feature: domain Description: VOC Location: 30511-30832 bp Feature: domain Description: VOC Location: 30511-30832 bp Feature: gene Location: 31185-32528 bp Ori: PAK04578.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31650-32286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31650-32 2 86 bp Feature: gene Location: 32305-32940 bp Ori: PAK04579.1 Feature: domain Description: AcrR Location: 32422-32836 bp Feature: domain Description: AcrR Location: 32 42 2 -32 836 bp Feature: gene Location: 33034-35238 bp Ori: PAK04580.1 Feature: domain Description: DUF3141 Location: 33106-34840 bp Feature: domain Description: DUF3141 Location: 33106-34840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cupin_6 (pfam12852), AraC (COG2207), VOC (cl14632), RVT-Retrons, AcrR (COG1309), DUF3141 (pfam11339)