myRT

myRT report for GCA_002278415.1_ASM227841v1

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Seq: NPFH01000004.1 Vibrio vulnificus strain WAPHLVBRA00003 NODE_4_length_559422_cov_63.2418, whole genome shotgun sequence (559422 bp)
Overview 1 RT 1: 38279-40456 bp Neighborhood of RT #1 [38279, 40456] arc_metj ParE RVT-Retrons HTH_XRE Feature: gene Location: 38279-38563 bp Feature: domain Description: arc_metj Location: 38291-38408 bp Feature: domain Description: arc_metj Location: 38291 -38408 bp Feature: gene Location: 38560-38838 bp Feature: domain Description: ParE Location: 38566-38833 bp Feature: domain Description: ParE Location: 38566-38833 bp Feature: gene Location: 38986-39945 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39148-39634 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 391 48-39634 bp Feature: gene Location: 39932-40228 bp Feature: domain Description: HTH_XRE Location: 39950-40118 bp Feature: domain Description: HTH_XRE Location: 39950-401 1 8 bp Feature: gene Location: 40271-40456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT arc_metj (LOAD_arc_metj), ParE (COG3668), RVT-Retrons, HTH_XRE (smart00530)

Seq: NPFH01000006.1 Vibrio vulnificus strain WAPHLVBRA00003 NODE_6_length_262265_cov_71.587, whole genome shotgun sequence (262265 bp)
Overview 1 RT 1: 174918-179593 bp Neighborhood of RT #1 [174918, 179593] TIGR02646 COG3950 RVT-Retrons COG4190 Feature: gene Location: 174918-175586 bp Feature: domain Description: TIGR02646 Location: 174984-175416 bp Feature: domain Description: TIGR02 646 Location: 174984-175416 bp Feature: gene Location: 175590-177272 bp Feature: domain Description: COG3950 Location: 175818-177183 bp Feature: domain Description: COG3950 Location: 175818-177183 bp Feature: gene Location: 177265-178188 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 177367-177949 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 177367-177949 bp Feature: gene Location: 178844-179230 bp Feature: domain Description: COG4190 Location: 178859-179189 bp Feature: domain Description: COG4190 Location: 178859-179189 bp Feature: gene Location: 179310-179593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, COG4190 (Predicted transcriptional regulator )