myRT

myRT report for GCA_002278455.1_ASM227845v1

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Seq: NOIY01000016.1 Vibrio vulnificus strain WAPHLVBRA00010 NODE_16_length_89269_cov_48.3506, whole genome shotgun sequence (89269 bp)
Overview 1 RT 1: 1922-6597 bp Neighborhood of RT #1 [1922, 6597] TIGR02646 COG3950 RVT-Retrons COG4190 Feature: gene Location: 1922-2590 bp Feature: domain Description: TIGR02646 Location: 1988-2420 bp Feature: domain Description: TIGR02646 Location: 1 988-2420 bp Feature: gene Location: 2594-4276 bp Feature: domain Description: COG3950 Location: 2822-4187 bp Feature: domain Description: COG3950 Location: 2822-41 87 bp Feature: gene Location: 4269-5192 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4371-4953 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4371 -4953 bp Feature: gene Location: 5848-6234 bp Feature: domain Description: COG4190 Location: 5863-6193 bp Feature: domain Description: COG41 90 Location: 5863-61 93 bp Feature: gene Location: 6314-6597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, COG4190 (Predicted transcriptional regulator )

Seq: NOIY01000003.1 Vibrio vulnificus strain WAPHLVBRA00010 NODE_3_length_339766_cov_43.3411, whole genome shotgun sequence (339766 bp)
Overview 1 RT 1: 299311-301333 bp Neighborhood of RT #1 [299311, 301488] HTH_XRE RVT-Retrons ParE arc_metj Feature: gene Location: 299311-299496 bp Feature: gene Location: 299539-299835 bp Feature: domain Description: HTH_XRE Location: 299557-299725 bp Feature: domain Description: HTH_XRE Location: 2 99557-2 9972 5 bp Feature: gene Location: 299822-300781 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 299984-300470 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 99984-300470 bp Feature: gene Location: 300929-301207 bp Feature: domain Description: ParE Location: 300935-301202 bp Feature: domain Description: ParE Location: 300935-3012 02 bp Feature: gene Location: 301204-301488 bp Feature: domain Description: arc_metj Location: 301216-301333 bp Feature: domain Description: arc_metj Location: 3012 16-301333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, ParE (COG3668), arc_metj (LOAD_arc_metj)