myRT

myRT report for GCA_002279765.1_ASM227976v1

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Seq: NCCR01000136.1 Verrucomicrobia bacterium 12-59-8 04302015_12_scaffold_907, whole genome shotgun sequence (12281 bp)
Overview 1 RT 1: 9337-12272 bp Neighborhood of RT #1 [9337, 12281] YfmG HRDC RVT-DGRs LRR_4 LRR_4 LRR Feature: gene Location: 9337-10092 bp Ori: OYW73701.1 Feature: domain Description: YfmG Location: 9487-10042 bp Feature: domain Description: YfmG Location: 9487-1 0042 bp Feature: gene Location: 10141-10587 bp Ori: OYW73702.1 Feature: domain Description: HRDC Location: 10363-10564 bp Feature: domain Description: HRDC Location: 1 0363-1 0564 bp Feature: gene Location: 10584-11885 bp Ori: OYW73703.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10794-11379 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 0794-1 1 379 bp Feature: gene Location: 11882-12281 bp Ori: OYW73704.1 Feature: domain Description: LRR_4 Location: 11954-12068 bp Feature: domain Description: LRR_4 Location: 1 1 954-1 2068 bp Feature: domain Description: LRR_4 Location: 12089-12194 bp Feature: domain Description: LRR_4 Location: 1 2089-1 21 94 bp Feature: domain Description: LRR Location: 12221-12272 bp Feature: domain Description: LRR Location: 1 2221 -1 2272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), HRDC (smart00341), RVT-DGRs, LRR_4 (pfam12799), LRR (smart00370)

Seq: NCCR01000304.1 Verrucomicrobia bacterium 12-59-8 04302015_12_scaffold_2721, whole genome shotgun sequence (5179 bp)
Overview 1 RT 1: 432-5104 bp Neighborhood of RT #1 [432, 5106] SDR_c8 group_II_RT_mat RVT-GII GIIM WHTH_GntR PurR Feature: gene Location: 432-722 bp Feature: gene Location: 1046-1831 bp Ori: OYW71100.1 Feature: domain Description: SDR_c8 Location: 1079-1817 bp Feature: domain Description: SDR_c8 Location: 1079-1817 bp Feature: gene Location: 2473-3798 bp Ori: OYW71102.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 2548-2734 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 548-2 734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2794-3412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 794-3412 bp Feature: domain Description: GIIM Note: maturase Location: 3472-3691 bp Feature: domain Description: GIIM Note: maturase Location: 3472 -3691 bp Feature: gene Location: 3952-5106 bp Ori: OYW71101.1 Feature: domain Description: WHTH_GntR Location: 4087-4249 bp Feature: domain Description: WHTH_GntR Location: 4087-42 49 bp Feature: domain Description: PurR Location: 4282-5104 bp Feature: domain Description: PurR Location: 42 82 -5104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SDR_c8 (cd08930), group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), WHTH_GntR (cd07377), PurR (COG1609)

Seq: NCCR01000333.1 Verrucomicrobia bacterium 12-59-8 04302015_12_scaffold_3562, whole genome shotgun sequence (6256 bp)
Overview 1 RT 1: 1-5834 bp Neighborhood of RT #1 [1, 6235] Piru_Ver_Nterm CxxCH_CxxCH_CxxCH_TIGR02603 group_II_RT_mat RVT-GII GIIM ISOPREN_C2_like ISOPREN_C2_like Feature: gene Location: 1-1638 bp Ori: OYW70763.1 Feature: domain Description: Piru_Ver_Nterm Location: 4-307 bp Feature: domain Description: Piru_Ver_Nterm Location: 4-3 07 bp Feature: domain Description: CxxCH_CxxCH_CxxCH_TIGR02603 Location: 1240-1627 bp Feature: domain Description: CxxCH_CxxCH_CxxCH_TIGR02603 Location: 1240-1627 bp Feature: gene Location: 2625-3621 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2655-2853 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2655-2853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2928-3111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2928-3 111 bp Feature: gene Location: 3615-4106 bp Ori: OYW70764.1 Feature: domain Description: GIIM Note: maturase Location: 3660-3885 bp Feature: domain Description: GIIM Note: maturase Location: 3 660-3 885 bp Feature: gene Location: 4205-6235 bp Ori: OYW70765.1 Feature: domain Description: ISOPREN_C2_like Location: 5213-5426 bp Feature: domain Description: ISOPREN_C2_like Location: 5213 -5426 bp Feature: domain Description: ISOPREN_C2_like Location: 5477-5834 bp Feature: domain Description: ISOPREN_C2_like Location: 5477-583 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Piru_Ver_Nterm (TIGR02604), CxxCH_CxxCH_CxxCH_TIGR02603, group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), ISOPREN_C2_like (cl08267)