myRT

myRT report for GCA_002280035.1_ASM228003v1

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Seq: NCDF01000404.1 Pseudomonadales bacterium 32-61-5 04302015_32_scaffold_25395, whole genome shotgun sequence (1775 bp)
Overview 1 RT 1: 1-1772 bp Neighborhood of RT #1 [1, 1775] RVT_N RVT-GII Feature: gene Location: 1-715 bp Feature: gene Location: 1292-1775 bp Feature: RT Description: RVT_N Location: 1337-1580 bp Feature: RT Description: RVT_N Location: 1 337-1 580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1625-1772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 625-1 772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: NCDF01000922.1 Pseudomonadales bacterium 32-61-5 04302015_32_scaffold_47989, whole genome shotgun sequence (2531 bp)
Overview 1 RT 1: 1-2115 bp Neighborhood of RT #1 [1, 2384] RVT-Retrons RVT-Retrons Feature: gene Location: 1-1203 bp Feature: gene Location: 1392-2384 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1647-1764 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1647-1764 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1869-2115 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1869-2 115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: NCDF01000008.1 Pseudomonadales bacterium 32-61-5 04302015_32_scaffold_4387, whole genome shotgun sequence (7169 bp)
Overview 1 RT 1: 1927-4838 bp Neighborhood of RT #1 [1927, 6012] PRK05387 degP_htrA_DO RVT_N RVT-GII Feature: gene Location: 1927-2988 bp Feature: domain Description: PRK05387 Location: 1933-2980 bp Feature: domain Description: PRK053 87 Location: 193 3 -2980 bp Feature: gene Location: 3029-4180 bp Feature: domain Description: degP_htrA_DO Location: 3197-4157 bp Feature: domain Description: degP_htrA_DO Location: 3 197-4157 bp Feature: gene Location: 4355-6012 bp Feature: RT Description: RVT_N Location: 4415-4658 bp Feature: RT Description: RVT_N Location: 4415-4658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4706-4838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4706-483 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05387 (histidinol-phosphate aminotransferase; Provisional), degP_htrA_DO (TIGR02037), RVT_N (pfam13655), RVT-GII