myRT

myRT report for GCA_002280725.1_ASM228072v1

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Seq: NCEM01000056.1 Alphaproteobacteria bacterium 32-64-14 04302015_32_scaffold_1165, whole genome shotgun sequence (16471 bp)
Overview 1 RT 1: 8794-13860 bp Neighborhood of RT #1 [8794, 13949] PadR DUF3810 RVT-UG7 PnbA ketosteroid_isomerase Feature: gene Location: 8794-9153 bp Ori: OYX46153.1 Feature: domain Description: PadR Location: 8842-9124 bp Feature: domain Description: PadR Location: 8842-91 24 bp Feature: gene Location: 9448-9909 bp Ori: OYX46154.1 Feature: domain Description: DUF3810 Location: 9676-9781 bp Feature: domain Description: DUF381 0 Location: 9676-9781 bp Feature: gene Location: 10349-11938 bp Ori: OYX46155.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 10754-11159 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 0754-1 1 1 59 bp Feature: gene Location: 12067-13683 bp Ori: OYX46156.1 Feature: domain Description: PnbA Location: 12268-13609 bp Feature: domain Description: PnbA Location: 1 2268-1 3609 bp Feature: gene Location: 13557-13949 bp Ori: OYX46162.1 Feature: domain Description: ketosteroid_isomerase Location: 13608-13860 bp Feature: domain Description: ketosteroid_isomerase Location: 1 3608-1 3860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), DUF3810 (pfam12725), RVT-UG7, PnbA (COG2272), ketosteroid_isomerase (cd00781)

Seq: NCEM01000071.1 Alphaproteobacteria bacterium 32-64-14 04302015_32_scaffold_1856, whole genome shotgun sequence (12272 bp)
Overview 1 RT 1: 5611-12079 bp Neighborhood of RT #1 [5611, 12093] TIR_2 TolBN TPR TPR RVT-GII PinE DUF2924 Feature: gene Location: 5611-7632 bp Feature: gene Location: 7629-9395 bp Ori: OYX45857.1 Feature: domain Description: TIR_2 Location: 7710-7983 bp Feature: domain Description: TIR_2 Location: 7710-7983 bp Feature: domain Description: TolBN Location: 8154-8571 bp Feature: domain Description: TolBN Location: 8154-8571 bp Feature: domain Description: TPR Location: 8790-9039 bp Feature: domain Description: TPR Location: 8790-9039 bp Feature: domain Description: TPR Location: 9102-9306 bp Feature: domain Description: TPR Location: 9102 -9306 bp Feature: gene Location: 9858-10055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9897-10056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9897-10056 bp Feature: gene Location: 10265-11719 bp Ori: OYX45858.1 Feature: domain Description: PinE Location: 10283-10970 bp Feature: domain Description: PinE Location: 102 83-10970 bp Feature: gene Location: 11716-12093 bp Ori: OYX45859.1 Feature: domain Description: DUF2924 Location: 11725-12079 bp Feature: domain Description: DUF2 92 4 Location: 1172 5-12 079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR_2 (pfam13676), TolBN (COG5616), TPR (smart00028), RVT-GII, PinE (COG1961), DUF2924 (pfam11149)