myRT

myRT report for GCA_002282785.1_ASM228278v1

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Seq: NCKO01000058.1 Thiomonas sp. 13-66-29 04302015_13_scaffold_206, whole genome shotgun sequence (17990 bp)
Overview 1 RT 1: 1574-5126 bp Neighborhood of RT #1 [1574, 5126] AcrR GrsT RVT-GII Feature: gene Location: 1574-2242 bp Ori: OZB61430.1 Feature: domain Description: AcrR Location: 1613-2198 bp Feature: domain Description: AcrR Location: 1 61 3-21 98 bp Feature: gene Location: 2325-3059 bp Ori: OZB61431.1 Feature: domain Description: GrsT Location: 2391-3054 bp Feature: domain Description: GrsT Location: 2391 -3054 bp Feature: gene Location: 3475-3741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3613-3742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361 3-3742 bp Feature: gene Location: 3823-4230 bp Feature: gene Location: 4278-5126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), GrsT (COG3208), RVT-GII

Seq: NCKO01000051.1 Thiomonas sp. 13-66-29 04302015_13_scaffold_173, whole genome shotgun sequence (19716 bp)
Overview 1 RT 1: 210-5559 bp Neighborhood of RT #1 [210, 5579] Cas2_I_II_III Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Cas_VVA1548 DUF1887 DUF1887 COG3597 Feature: gene Location: 210-491 bp Ori: OZB62243.1 Feature: domain Description: Cas2_I_II_III Location: 228-450 bp Feature: domain Description: Cas2 _I_II_III Location: 2 2 8-450 bp Feature: gene Location: 509-793 bp Ori: OZB62244.1 Feature: domain Description: Cas2_I_II_III Location: 524-752 bp Feature: domain Description: Cas2 _I_II_III Location: 52 4-752 bp Feature: gene Location: 790-2916 bp Ori: OZB62245.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1021-1627 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 102 1-162 7 bp Feature: domain Description: Cas1_I-II-III Location: 1933-2860 bp Feature: domain Description: Cas1_I-II-III Location: 1933-2 860 bp Feature: gene Location: 3021-4886 bp Ori: OZB62246.1 Feature: domain Description: Cas_VVA1548 Location: 3033-3318 bp Feature: domain Description: Cas_VVA1548 Location: 3033-3318 bp Feature: domain Description: DUF1887 Location: 3390-3789 bp Feature: domain Description: DUF1887 Location: 3390-3789 bp Feature: domain Description: DUF1887 Location: 4206-4587 bp Feature: domain Description: DUF1887 Location: 42 06-4587 bp Feature: gene Location: 5226-5579 bp Ori: OZB62247.1 Feature: domain Description: COG3597 Location: 5244-5559 bp Feature: domain Description: COG3597 Location: 52 44-5559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas_VVA1548 (pfam09652), DUF1887 (pfam09002), COG3597 (Uncharacterized conserved protein, DUF697 family )