myRT

myRT report for GCA_002283535.1_ASM228353v1

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Seq: MVPP01000028.1 Salmonella enterica subsp. enterica serovar Typhimurium strain GMR-S-356.16 contig_18_1, whole genome shotgun sequence (339743 bp)
Overview 1 RT 1: 168954-175259 bp Neighborhood of RT #1 [168954, 175261] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 168954-170654 bp Ori: PAR05651.1 Feature: domain Description: 5 Location: 170178-170472 bp Feature: domain Description: 5 Location: 1 701 78-1 70472 bp Feature: gene Location: 171406-171591 bp Feature: gene Location: 171699-172325 bp Ori: PAR05652.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 171702-172137 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 71 702-1 721 37 bp Feature: gene Location: 172649-173155 bp Ori: PAR05484.1 Feature: domain Description: PRK10201 Location: 172652-173150 bp Feature: domain Description: PRK1 0201 Location: 1 72652-1 731 50 bp Feature: gene Location: 173279-175261 bp Ori: PAR05485.1 Feature: domain Description: PRK05658 Location: 173417-175259 bp Feature: domain Description: PRK05658 Location: 1 7341 7-1 75259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: MVPP01000059.1 Salmonella enterica subsp. enterica serovar Typhimurium strain GMR-S-356.16 contig_45_1, whole genome shotgun sequence (48738 bp)
Overview 1 RT 1: 44740-48626 bp Neighborhood of RT #1 [44740, 48626] PRK10473 RVT-Retrons Feature: gene Location: 44740-45927 bp Ori: PAR01102.1 Feature: domain Description: PRK10473 Location: 44743-45919 bp Feature: domain Description: PRK10473 Location: 44743-45919 bp Feature: gene Location: 46272-46481 bp Feature: gene Location: 46729-47598 bp Ori: PAR01108.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46774-47359 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46774-47359 bp Feature: gene Location: 47664-48626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons