myRT

myRT report for GCA_002283795.1_ASM228379v1

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Seq: MVPR01000049.1 Salmonella enterica subsp. enterica serovar Typhimurium strain GMR-S-1257 contig_41_1, whole genome shotgun sequence (48740 bp)
Overview 1 RT 1: 44742-48628 bp Neighborhood of RT #1 [44742, 48628] PRK10473 RVT-Retrons Feature: gene Location: 44742-45929 bp Ori: PAR11156.1 Feature: domain Description: PRK10473 Location: 44745-45921 bp Feature: domain Description: PRK1 0473 Location: 44745-45921 bp Feature: gene Location: 46298-46483 bp Feature: gene Location: 46731-47600 bp Ori: PAR11162.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46776-47361 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46776-47361 bp Feature: gene Location: 47666-48628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: MVPR01000036.1 Salmonella enterica subsp. enterica serovar Typhimurium strain GMR-S-1257 contig_30_1, whole genome shotgun sequence (343658 bp)
Overview 1 RT 1: 63611-69916 bp Neighborhood of RT #1 [63611, 69918] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 63611-65311 bp Ori: PAR12308.1 Feature: domain Description: 5 Location: 64835-65129 bp Feature: domain Description: 5 Location: 64835-6512 9 bp Feature: gene Location: 66063-66248 bp Feature: gene Location: 66356-66982 bp Ori: PAR12310.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 66359-66794 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 66359-66794 bp Feature: gene Location: 67306-67812 bp Ori: PAR12311.1 Feature: domain Description: PRK10201 Location: 67309-67807 bp Feature: domain Description: PRK102 01 Location: 67309-67807 bp Feature: gene Location: 67936-69918 bp Ori: PAR12312.1 Feature: domain Description: PRK05658 Location: 68074-69916 bp Feature: domain Description: PRK05658 Location: 68074-69916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)