myRT

myRT report for GCA_002284515.1_ASM228451v1

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Seq: NOJG01000003.1 Vibrio vulnificus strain PNUSAV000042 NODE_3_length_402039_cov_30.3809, whole genome shotgun sequence (402039 bp)
Overview 1 RT 1: 361584-363606 bp Neighborhood of RT #1 [361584, 363761] HTH_XRE RVT-Retrons ParE arc_metj Feature: gene Location: 361584-361769 bp Feature: gene Location: 361812-362108 bp Feature: domain Description: HTH_XRE Location: 361830-361998 bp Feature: domain Description: HTH_XRE Location: 361 830-361 998 bp Feature: gene Location: 362095-363054 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 362257-362743 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 362257-362743 bp Feature: gene Location: 363202-363480 bp Feature: domain Description: ParE Location: 363208-363475 bp Feature: domain Description: ParE Location: 363208-363475 bp Feature: gene Location: 363477-363761 bp Feature: domain Description: arc_metj Location: 363489-363606 bp Feature: domain Description: arc_metj Location: 363489-363606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, ParE (COG3668), arc_metj (LOAD_arc_metj)

Seq: NOJG01000009.1 Vibrio vulnificus strain PNUSAV000042 NODE_9_length_262265_cov_36.2233, whole genome shotgun sequence (262265 bp)
Overview 1 RT 1: 174918-179593 bp Neighborhood of RT #1 [174918, 179593] TIGR02646 COG3950 RVT-Retrons COG4190 Feature: gene Location: 174918-175586 bp Feature: domain Description: TIGR02646 Location: 174984-175416 bp Feature: domain Description: TIGR02 646 Location: 174984-175416 bp Feature: gene Location: 175590-177272 bp Feature: domain Description: COG3950 Location: 175818-177183 bp Feature: domain Description: COG3950 Location: 175818-177183 bp Feature: gene Location: 177265-178188 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 177367-177949 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 177367-177949 bp Feature: gene Location: 178844-179230 bp Feature: domain Description: COG4190 Location: 178859-179189 bp Feature: domain Description: COG4190 Location: 178859-179189 bp Feature: gene Location: 179310-179593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, COG4190 (Predicted transcriptional regulator )