myRT

myRT report for GCA_002284785.1_ASM228478v1

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Seq: NJAE01000103.1 Escherichia coli strain 129.h contig_103, whole genome shotgun sequence (94340 bp)
Overview 1 RT 1: 89667-94338 bp Neighborhood of RT #1 [89667, 94340] PRK09678 RVT-Retrons Arm-DNA-bind_3 PHA02517 Feature: gene Location: 89667-89939 bp Feature: domain Description: PRK09678 Location: 89676-89832 bp Feature: domain Description: PRK09678 Location: 89676-89832 bp Feature: gene Location: 90585-91553 bp Feature: gene Location: 91555-92487 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91657-92251 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91 657-92251 bp Feature: gene Location: 92942-93855 bp Feature: domain Description: Arm-DNA-bind_3 Location: 92951-93203 bp Feature: domain Description: Arm-DNA-bind_3 Location: 92951 -93203 bp Feature: gene Location: 94086-94340 bp Feature: domain Description: PHA02517 Location: 94092-94338 bp Feature: domain Description: PHA0251 7 Location: 94092-94338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, Arm-DNA-bind_3 (pfam13356), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NJAE01000011.1 Escherichia coli strain 129.h contig_11, whole genome shotgun sequence (2360 bp)
Overview 1 RT 1: 89-2023 bp Neighborhood of RT #1 [89, 2268] RVT-GII GIIM Feature: gene Location: 89-451 bp Feature: gene Location: 366-674 bp Feature: gene Location: 745-2268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1018-1750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1018-1750 bp Feature: domain Description: GIIM Note: maturase Location: 1825-2023 bp Feature: domain Description: GIIM Note: maturase Location: 182 5-2 02 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)