myRT

myRT report for GCA_002285055.1_ASM228505v1

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Seq: NQYJ01000016.1 Candidatus Izimaplasma sp. ZiA1 scaffold_15, whole genome shotgun sequence (23284 bp)
Overview 1 RT 1: 3471-11125 bp Neighborhood of RT #1 [3471, 11139] COG3183 RVT-Retrons COG0610 HsdM Feature: gene Location: 3471-3878 bp Feature: domain Description: COG3183 Location: 3531-3858 bp Feature: domain Description: COG31 83 Location: 3531 -3858 bp Feature: gene Location: 4254-5417 bp Feature: gene Location: 5642-6733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5894-6443 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5894-6443 bp Feature: gene Location: 6730-9579 bp Feature: domain Description: COG0610 Location: 6742-9571 bp Feature: domain Description: COG061 0 Location: 6742-9571 bp Feature: gene Location: 9595-11139 bp Feature: domain Description: HsdM Location: 9610-11125 bp Feature: domain Description: HsdM Location: 961 0-1 1 1 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3183 (Predicted restriction endonuclease, HNH family ), RVT-Retrons, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), HsdM (COG0286)