myRT

myRT report for GCA_002285215.1_ASM228521v1

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Seq: NQYV01000062.1 Klebsiella pneumoniae strain BA356 NODE_62_length_34485_cov_19.9362_ID_123, whole genome shotgun sequence (34485 bp)
Overview 1 RT 1: 244-7618 bp Neighborhood of RT #1 [244, 7635] PRK09692 Integrase_1 RVT-UG4 PapC_N FimC Feature: gene Location: 244-1480 bp Feature: domain Description: PRK09692 Location: 250-661 bp Feature: domain Description: PRK09692 Location: 250-661 bp Feature: gene Location: 1707-2167 bp Feature: domain Description: Integrase_1 Location: 1728-1866 bp Feature: domain Description: Integrase_1 Location: 1 728-1 866 bp Feature: gene Location: 2158-4236 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2569-3013 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2569-301 3 bp Feature: gene Location: 4233-6824 bp Feature: domain Description: PapC_N Location: 4344-4779 bp Feature: domain Description: PapC_N Location: 4344-4779 bp Feature: gene Location: 6871-7635 bp Ori: PAT28486.1 Feature: domain Description: FimC Location: 6916-7618 bp Feature: domain Description: FimC Location: 691 6-761 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, PapC_N (pfam13954), FimC (COG3121)

Seq: NQYV01000100.1 Klebsiella pneumoniae strain BA356 NODE_100_length_16212_cov_44.8777_ID_199, whole genome shotgun sequence (16212 bp)
Overview 1 RT 1: 98-3460 bp Neighborhood of RT #1 [98, 3599] RVT_N RVT-GII DUF1380 Feature: gene Location: 98-273 bp Feature: gene Location: 1010-2676 bp Gene: ltrA Feature: domain Description: RVT_N Location: 1058-1295 bp Feature: domain Description: RVT_N Location: 1058-12 95 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1346-1979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1346-1979 bp Feature: gene Location: 2990-3181 bp Feature: gene Location: 3178-3599 bp Feature: domain Description: DUF1380 Location: 3181-3460 bp Feature: domain Description: DUF1380 Location: 3181-3460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, DUF1380 (pfam07128)