myRT

myRT report for GCA_002285555.1_ASM228555v1

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Seq: NRGY01000003.1 Psychrobacter sp. JB193 SAMN07141171.103, whole genome shotgun sequence (370985 bp)
Overview 1 RT 1: 332996-347184 bp Neighborhood of RT #1 [332996, 347315] COG2308 Lysophospholipase_L1_like RVT-Retrons WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 332996-335200 bp Ori: PAT62431.1 Feature: domain Description: COG2308 Location: 333014-334421 bp Feature: domain Description: COG2308 Location: 33301 4-334421 bp Feature: gene Location: 335374-336012 bp Ori: PAT62432.1 Feature: domain Description: Lysophospholipase_L1_like Location: 335488-335989 bp Feature: domain Description: Lysophospholipase_L1 _like Location: 335488-335989 bp Feature: gene Location: 336086-337462 bp Ori: PAT62476.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 336539-337187 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 336539-3371 87 bp Feature: gene Location: 337517-339670 bp Feature: gene Location: 339660-347315 bp Ori: PAT62434.1 Feature: domain Description: WD40 Location: 339951-340659 bp Feature: domain Description: WD40 Location: 339951 -340659 bp Feature: domain Description: HEAT_2 Location: 341889-342147 bp Feature: domain Description: HEAT_2 Location: 341 889-3421 47 bp Feature: domain Description: HEAT_2 Location: 342627-342789 bp Feature: domain Description: HEAT_2 Location: 342627-342789 bp Feature: domain Description: HEAT_2 Location: 345534-345816 bp Feature: domain Description: HEAT_2 Location: 345534-34581 6 bp Feature: domain Description: HEAT_2 Location: 347022-347184 bp Feature: domain Description: HEAT_2 Location: 347022-3471 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2308 (Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily ), Lysophospholipase_L1_like (cd01822), RVT-Retrons, WD40 (smart00320), HEAT_2 (pfam13646)

Seq: NRGY01000002.1 Psychrobacter sp. JB193 SAMN07141171.102, whole genome shotgun sequence (1228459 bp)
Overview 1 RT 1: 455980-461095 bp Neighborhood of RT #1 [455980, 461115] YfeH GST_N_1 GST_C_3 RVT-UG2 COG3453 COG3453 Feature: gene Location: 455980-456843 bp Ori: PAT62831.1 Feature: domain Description: YfeH Location: 456004-456820 bp Feature: domain Description: YfeH Location: 456004-45682 0 bp Feature: gene Location: 457187-457930 bp Ori: PAT62832.1 Feature: domain Description: GST_N_1 Location: 457205-457430 bp Feature: domain Description: GST_N_1 Location: 4572 05-457430 bp Feature: domain Description: GST_C_3 Location: 457514-457850 bp Feature: domain Description: GST_C_3 Location: 457514-457850 bp Feature: gene Location: 458158-459696 bp Ori: PAT62833.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 458389-459334 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 458389-459334 bp Feature: gene Location: 460157-460489 bp Ori: PAT62834.1 Feature: domain Description: COG3453 Location: 460166-460469 bp Feature: domain Description: COG3453 Location: 460166-460469 bp Feature: gene Location: 460789-461115 bp Ori: PAT62835.1 Feature: domain Description: COG3453 Location: 460795-461095 bp Feature: domain Description: COG3453 Location: 460795-461095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfeH (COG0385), GST_N_1 (cd03043), GST_C_3 (pfam14497), RVT-UG2, COG3453 (Predicted phosphohydrolase, protein tyrosine phosphatase (PTP) superfamily, DUF442 family )