myRT

myRT report for GCA_002286675.1_ASM228667v1

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Seq: NRHX01000386.1 Klebsiella pneumoniae strain BA655 NODE_386_length_1399_cov_53.8908_ID_771, whole genome shotgun sequence (1399 bp)
Overview 1 RT 1: 1-1007 bp Neighborhood of RT #1 [1, 1399] Zn_Tnp_IS1 RVT-GII Feature: gene Location: 1-66 bp Ori: PAU40957.1 Feature: domain Description: Zn_Tnp_IS1 Location: 7-67 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7-67 bp Feature: gene Location: 218-1399 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-1007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-1 007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS1 (pfam03811), RVT-GII

Seq: NRHX01000115.1 Klebsiella pneumoniae strain BA655 NODE_115_length_15250_cov_13.3944_ID_229, whole genome shotgun sequence (15250 bp)
Overview 1 RT 1: 9919-14799 bp Neighborhood of RT #1 [9919, 14801] PRK09951 RVT-UG11 umuC Feature: gene Location: 9919-10882 bp Feature: gene Location: 11086-11754 bp Ori: PAU42066.1 Feature: domain Description: PRK09951 Location: 11089-11752 bp Feature: domain Description: PRK09951 Location: 11089-11752 bp Feature: gene Location: 11955-12584 bp Ori: PAU42070.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 11958-12405 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 11958-12 405 bp Feature: gene Location: 13123-13380 bp Feature: gene Location: 13536-14801 bp Ori: PAU42068.1 Feature: domain Description: umuC Location: 13539-14799 bp Feature: domain Description: umuC Location: 13539-14799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)

Seq: NRHX01000058.1 Klebsiella pneumoniae strain BA655 NODE_58_length_25994_cov_19.8005_ID_115, whole genome shotgun sequence (25994 bp)
Overview 1 RT 1: 23242-25994 bp Neighborhood of RT #1 [23242, 25994] HTH_XRE RVT-Retrons Feature: gene Location: 23242-23681 bp Feature: gene Location: 24302-24610 bp Ori: PAU42638.1 Feature: domain Description: HTH_XRE Location: 24314-24479 bp Feature: domain Description: HTH_XRE Location: 243 14-24479 bp Feature: gene Location: 24588-25537 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24768-25014 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24768-25014 bp Feature: gene Location: 25676-25994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons