myRT

myRT report for GCA_002287295.1_ASM228729v1

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Seq: NOJF01000001.1 Vibrio vulnificus strain WAPHLVBRA00002 NODE_1_length_1298603_cov_47.4824, whole genome shotgun sequence (1298603 bp)
Overview 1 RT 1: 38279-40456 bp Neighborhood of RT #1 [38279, 40456] arc_metj ParE RVT-Retrons HTH_XRE Feature: gene Location: 38279-38563 bp Feature: domain Description: arc_metj Location: 38291-38408 bp Feature: domain Description: arc_metj Location: 38291 -38408 bp Feature: gene Location: 38560-38838 bp Feature: domain Description: ParE Location: 38566-38833 bp Feature: domain Description: ParE Location: 38566-38833 bp Feature: gene Location: 38986-39945 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39148-39634 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 391 48-39634 bp Feature: gene Location: 39932-40228 bp Feature: domain Description: HTH_XRE Location: 39950-40118 bp Feature: domain Description: HTH_XRE Location: 39950-401 1 8 bp Feature: gene Location: 40271-40456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT arc_metj (LOAD_arc_metj), ParE (COG3668), RVT-Retrons, HTH_XRE (smart00530)

Seq: NOJF01000005.1 Vibrio vulnificus strain WAPHLVBRA00002 NODE_5_length_262041_cov_54.7471, whole genome shotgun sequence (262041 bp)
Overview 1 RT 1: 174694-179369 bp Neighborhood of RT #1 [174694, 179369] TIGR02646 COG3950 RVT-Retrons COG4190 Feature: gene Location: 174694-175362 bp Feature: domain Description: TIGR02646 Location: 174760-175192 bp Feature: domain Description: TIGR02 646 Location: 174760-175192 bp Feature: gene Location: 175366-177048 bp Feature: domain Description: COG3950 Location: 175594-176959 bp Feature: domain Description: COG3950 Location: 175594-176959 bp Feature: gene Location: 177041-177964 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 177143-177725 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 177143-17772 5 bp Feature: gene Location: 178620-179006 bp Feature: domain Description: COG4190 Location: 178635-178965 bp Feature: domain Description: COG4190 Location: 178635-178965 bp Feature: gene Location: 179086-179369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, COG4190 (Predicted transcriptional regulator )