myRT

myRT report for GCA_002287335.1_Bp8962

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Seq: NQMY01000038.1 Burkholderia ubonensis strain Bp8962 Contig_43, whole genome shotgun sequence (37424 bp)
Overview 1 RT 1: 1774-7775 bp Neighborhood of RT #1 [1774, 7786] DUF3141 AcrR RVT-Retrons VOC Cupin_6 AraC Feature: gene Location: 1774-3978 bp Ori: PAJ84447.1 Feature: domain Description: DUF3141 Location: 1846-3580 bp Feature: domain Description: DUF31 41 Location: 1 846-3580 bp Feature: gene Location: 4072-4707 bp Ori: PAJ84448.1 Feature: domain Description: AcrR Location: 4189-4603 bp Feature: domain Description: AcrR Location: 41 89-4603 bp Feature: gene Location: 4484-5827 bp Ori: PAJ84449.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4949-5585 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4949-5585 bp Feature: gene Location: 6130-6516 bp Ori: PAJ84450.1 Feature: domain Description: VOC Location: 6145-6466 bp Feature: domain Description: VOC Location: 61 45-6466 bp Feature: gene Location: 6959-7786 bp Ori: PAJ84451.1 Feature: domain Description: Cupin_6 Location: 6968-7427 bp Feature: domain Description: Cupin_6 Location: 6968-7427 bp Feature: domain Description: AraC Location: 7445-7775 bp Feature: domain Description: AraC Location: 7445-7775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3141 (pfam11339), AcrR (COG1309), RVT-Retrons, VOC (cl14632), Cupin_6 (pfam12852), AraC (COG2207)

Seq: NQMY01000012.1 Burkholderia ubonensis strain Bp8962 Contig_2, whole genome shotgun sequence (467919 bp)
Overview 1 RT 1: 179979-187891 bp Neighborhood of RT #1 [179979, 188658] VgrG COG4253 RVT-UG7 PinE ADP_ribosyl_GH Feature: gene Location: 179979-182690 bp Ori: PAJ87299.1 Feature: domain Description: VgrG Location: 180027-181788 bp Feature: domain Description: VgrG Location: 18002 7-181788 bp Feature: domain Description: COG4253 Location: 181803-182628 bp Feature: domain Description: COG42 53 Location: 181803-182 62 8 bp Feature: gene Location: 183109-183843 bp Feature: gene Location: 183824-185464 bp Ori: PAJ87301.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 184241-184658 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1842 41-184658 bp Feature: gene Location: 185825-186424 bp Ori: PAJ87302.1 Feature: domain Description: PinE Location: 185828-186410 bp Feature: domain Description: PinE Location: 18582 8-186410 bp Feature: gene Location: 186832-188658 bp Ori: PAJ87303.1 Feature: domain Description: ADP_ribosyl_GH Location: 186922-187891 bp Feature: domain Description: ADP_ribosyl_GH Location: 18692 2 -187891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VgrG (COG3501), COG4253 (Uncharacterized conserved protein, DUF2345 family ), RVT-UG7, PinE (COG1961), ADP_ribosyl_GH (pfam03747)