myRT

myRT report for GCA_002287565.1_ASM228756v1

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Seq: NQMS01000001.1 Hafnia paralvei strain CITHA-6 NODE_1_length_1088113_cov_12.7284_ID_2499, whole genome shotgun sequence (1088113 bp)
Overview 1 RT 1: 105869-111213 bp 2 RT 2: 823668-828590 bp Neighborhood of RT #1 [105869, 111233] MobC Relaxase RVT-Retrons PRK09692 Neighborhood of RT #2 [823668, 828601] RVT-Retrons CybB PRK09978 Feature: gene Location: 105869-106243 bp Feature: domain Description: MobC Location: 106091-106211 bp Feature: domain Description: MobC Location: 1 06091 -1 0621 1 bp Feature: gene Location: 106240-107703 bp Feature: domain Description: Relaxase Location: 106270-106987 bp Feature: domain Description: Relaxase Location: 1 06270-1 06987 bp Feature: gene Location: 107755-108693 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 107878-108466 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 07878-1 08466 bp Feature: gene Location: 108683-109639 bp Feature: gene Location: 110004-111233 bp Feature: domain Description: PRK09692 Location: 110007-111213 bp Feature: domain Description: PRK09692 Location: 1 1 0007-1 1 1 21 3 bp Feature: gene Location: 823668-824984 bp Feature: gene Location: 824977-825183 bp Feature: gene Location: 825188-826339 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 825431-826073 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 825431 -826073 bp Feature: gene Location: 827050-827583 bp Feature: domain Description: CybB Location: 827056-827575 bp Feature: domain Description: CybB Location: 827056-827575 bp Feature: gene Location: 827855-828601 bp Feature: domain Description: PRK09978 Location: 827891-828590 bp Feature: domain Description: PRK09978 Location: 827891 -828590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), Relaxase (pfam03432), RVT-Retrons, PRK09692 (Integrase; provisional), CybB (COG3038), PRK09978 (DNA-binding transcriptional regulator GadX; Provisional)