myRT

myRT report for GCA_002289455.1_ASM228945v1

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Seq: NTFS01000298.1 Calothrix elsteri CCALA 953 scaffold298, whole genome shotgun sequence (8381 bp)
Overview 1 RT 1: 1040-4864 bp Neighborhood of RT #1 [1040, 5109] RVT-CRISPR cas1 CHAT Dcm Feature: gene Location: 1040-2752 bp Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1046-1526 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 046-1 526 bp Feature: domain Description: cas1 Location: 1742-2723 bp Feature: domain Description: cas1 Location: 1 742-2723 bp Feature: gene Location: 2748-4613 bp Feature: domain Description: CHAT Location: 3570-4599 bp Feature: domain Description: CHAT Location: 3570-4599 bp Feature: gene Location: 4690-5109 bp Feature: domain Description: Dcm Location: 4693-4864 bp Feature: domain Description: Dcm Location: 4693-4864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, cas1 (TIGR00287), CHAT (pfam12770), Dcm (COG0270)

Seq: NTFS01000032.1 Calothrix elsteri CCALA 953 scaffold32, whole genome shotgun sequence (29307 bp)
Overview 1 RT 1: 3013-7320 bp Neighborhood of RT #1 [3013, 7320] RVT_N RVT-GII McrA Feature: gene Location: 3013-3468 bp Feature: gene Location: 3484-4122 bp Feature: gene Location: 4674-6248 bp Ori: PAX59868.1 Feature: domain Description: RVT_N Location: 4710-4956 bp Feature: domain Description: RVT_N Location: 4710-4956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5007-5661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5007-5661 bp Feature: domain Description: McrA Location: 5901-6216 bp Feature: domain Description: McrA Location: 5901-62 16 bp Feature: gene Location: 6433-7068 bp Feature: gene Location: 7099-7320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058)