myRT

myRT report for GCA_002290415.1_ASM229041v1

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Seq: NIYQ01000154.1 Escherichia coli strain CTRSIUE-6 NODE_7_length_191413_cov_45.7062_ID_13.ctg_1, whole genome shotgun sequence (191413 bp)
Overview 1 RT 1: 6469-11526 bp Neighborhood of RT #1 [6469, 11528] Caudo_TAP RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 6469-7053 bp Feature: domain Description: Caudo_TAP Location: 6685-7042 bp Feature: domain Description: Caudo_TAP Location: 6685-7042 bp Feature: gene Location: 7040-7360 bp Feature: gene Location: 7498-9102 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7789-8380 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7789-8380 bp Feature: domain Description: TIR_2 Location: 8707-8995 bp Feature: domain Description: TIR_2 Location: 8707-8995 bp Feature: gene Location: 9462-9722 bp Feature: domain Description: PRK10597 Location: 9465-9705 bp Feature: domain Description: PRK1 0597 Location: 9465-9705 bp Feature: gene Location: 9942-11528 bp Feature: domain Description: prfC Location: 9960-11526 bp Feature: domain Description: prfC Location: 9960-1 1 526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Caudo_TAP (pfam02413), RVT-Retrons, TIR_2 (pfam13676), PRK10597 (DNA damage-inducible protein I; Provisional), prfC (TIGR00503)

Seq: NIYQ01000014.1 Escherichia coli strain CTRSIUE-6 NODE_8_length_181924_cov_51.5164_ID_15.ctg_1, whole genome shotgun sequence (181924 bp)
Overview 1 RT 1: 130919-134799 bp Neighborhood of RT #1 [130919, 134804] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 130919-131635 bp Feature: domain Description: rph Location: 130922-131630 bp Feature: domain Description: rph Location: 13092 2 -131630 bp Feature: gene Location: 131702-132343 bp Feature: domain Description: pyrE Location: 131705-132338 bp Feature: domain Description: pyrE Location: 131705-132 338 bp Feature: gene Location: 132641-133600 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132776-133325 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132 776-13332 5 bp Feature: gene Location: 133646-134242 bp Feature: domain Description: slmA Location: 133652-134228 bp Feature: domain Description: slmA Location: 133652 -1342 2 8 bp Feature: gene Location: 134349-134804 bp Feature: domain Description: dut Location: 134352-134799 bp Feature: domain Description: dut Location: 134352 -134799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)