myRT

myRT report for GCA_002290865.1_ASM229086v1

Download annotations/find similar RTs

Seq: NSEG01000357.1 Escherichia coli strain JEONG-5232 NODE_324_length_2102_cov_9.37418_ID_647, whole genome shotgun sequence (2102 bp) Associated domains: RVT-GII, IstB_IS21 (pfam01695), Y1_Tnp (pfam01797)

Seq: NSEG01000104.1 Escherichia coli strain JEONG-5232 NODE_424_length_935_cov_11.9257_ID_847, whole genome shotgun sequence (935 bp) Associated domains: RVT_N (pfam13655), RVT-GII

Seq: NSEG01000141.1 Escherichia coli strain JEONG-5232 NODE_254_length_4223_cov_9.15698_ID_507, whole genome shotgun sequence (4223 bp) Associated domains: PrgH (TIGR02554), RVT-UG4

Seq: NSEG01000258.1 Escherichia coli strain JEONG-5232 NODE_260_length_3983_cov_8.29487_ID_519, whole genome shotgun sequence (3983 bp) Associated domains: DEDD_Tnp_IS110 (pfam01548), ParE_toxin (pfam05016), RVT-UG4

Seq: NSEG01000165.1 Escherichia coli strain JEONG-5232 NODE_66_length_23150_cov_6.00252_ID_131, whole genome shotgun sequence (23150 bp) Associated domains: RVT_N (pfam13655), RVT-GII, PRK10472 (low affinity gluconate transporter; Provisional), PRK10739 (YhgN family NAAT transporter)

Seq: NSEG01000565.1 Escherichia coli strain JEONG-5232 NODE_414_length_993_cov_36.4215_ID_827, whole genome shotgun sequence (993 bp) Associated domains: RVT-GII, GIIM (pfam08388)

Seq: NSEG01000186.1 Escherichia coli strain JEONG-5232 NODE_192_length_7022_cov_14.6319_ID_383, whole genome shotgun sequence (7022 bp) Associated domains: HTH_28 (pfam13518), rve (pfam00665), rve_2 (pfam13333), PRK09738 (small toxic polypeptide; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), HNH (pfam01844)

Seq: NSEG01000102.1 Escherichia coli strain JEONG-5232 NODE_191_length_7047_cov_7.88512_ID_381, whole genome shotgun sequence (7047 bp) Associated domains: rve (pfam00665), RVT-GII, GIIM (pfam08388), InsQ (COG0675)