myRT

myRT report for GCA_002291145.1_ASM229114v1

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Seq: NTGE01000192.1 Streptomyces sp. SA15 spades_002_93_len:65182_pilon, whole genome shotgun sequence (65190 bp)
Overview 1 RT 1: 56624-62792 bp Neighborhood of RT #1 [56624, 62926] COG3293 COG3293 DUF4240 RVT-GII RVT-GII GIIM COG5659 DDE_3 Feature: gene Location: 56624-57492 bp Feature: domain Description: COG3293 Location: 56636-56960 bp Feature: domain Description: COG3293 Location: 56636-56960 bp Feature: domain Description: COG3293 Location: 57050-57458 bp Feature: domain Description: COG3293 Location: 57050-57458 bp Feature: gene Location: 57817-58383 bp Ori: PAZ10506.1 Feature: domain Description: DUF4240 Location: 57820-58204 bp Feature: domain Description: DUF4240 Location: 57820-58204 bp Feature: gene Location: 59033-59671 bp Ori: PAZ10507.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59372-59561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59372-59561 bp Feature: gene Location: 59533-60396 bp Ori: PAZ10508.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59554-60010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59554-6001 0 bp Feature: domain Description: GIIM Note: maturase Location: 60091-60313 bp Feature: domain Description: GIIM Note: maturase Location: 60091 -6031 3 bp Feature: gene Location: 60959-62227 bp Ori: PAZ10520.1 Feature: domain Description: COG5659 Location: 60968-61994 bp Feature: domain Description: COG5659 Location: 60968-61 994 bp Feature: gene Location: 62399-62926 bp Ori: PAZ10509.1 Feature: domain Description: DDE_3 Location: 62426-62792 bp Feature: domain Description: DDE_3 Location: 62426-62792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3293 (Transposase ), DUF4240 (pfam14024), RVT-GII, GIIM (pfam08388), COG5659 (SRSO17 transposase ), DDE_3 (pfam13358)

Seq: NTGE01000150.1 Streptomyces sp. SA15 spades_001_5_len_T:186881_pilon, whole genome shotgun sequence (186881 bp)
Overview 1 RT 1: 95107-99457 bp Neighborhood of RT #1 [95107, 99645] APH RVT-GII MRJP SnoaL_2 Feature: gene Location: 95107-95707 bp Feature: gene Location: 95794-96756 bp Ori: PAZ11667.1 Feature: domain Description: APH Location: 95923-96565 bp Feature: domain Description: APH Location: 9592 3-96565 bp Feature: gene Location: 97218-97490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97224-97488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 972 2 4-97488 bp Feature: gene Location: 97678-98835 bp Ori: PAZ11668.1 Feature: domain Description: MRJP Location: 97987-98749 bp Feature: domain Description: MRJP Location: 97987-98749 bp Feature: gene Location: 99133-99645 bp Ori: PAZ11669.1 Feature: domain Description: SnoaL_2 Location: 99169-99457 bp Feature: domain Description: SnoaL_2 Location: 99169-99457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT APH (pfam01636), RVT-GII, MRJP (pfam03022), SnoaL_2 (pfam12680)

Seq: NTGE01000116.1 Streptomyces sp. SA15 spades_002_31_len:88351_pilon, whole genome shotgun sequence (88387 bp)
Overview 1 RT 1: 1-2387 bp Neighborhood of RT #1 [1, 2455] RVT-GII GIIM PRK09183 TIGR03083 Feature: gene Location: 1-1317 bp Ori: PAZ12867.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124-817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124-817 bp Feature: domain Description: GIIM Note: maturase Location: 886-1120 bp Feature: domain Description: GIIM Note: maturase Location: 886-1120 bp Feature: gene Location: 1433-1684 bp Feature: domain Description: PRK09183 Location: 1442-1658 bp Feature: domain Description: PRK09183 Location: 1442-1658 bp Feature: gene Location: 1790-2455 bp Ori: PAZ12868.1 Feature: domain Description: TIGR03083 Location: 1850-2387 bp Feature: domain Description: TIGR03 083 Location: 1850-23 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK09183 (transposase/IS protein; Provisional), TIGR03083 (uncharacterized Actinobacterial protein TIGR03083)