myRT

myRT report for GCA_002292535.1_ASM229253v1

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Seq: NSFE01000028.1 Mycobacterium intracellulare strain FLAC0162 NODE_26_length_27974_cov_41.8578, whole genome shotgun sequence (377324 bp)
Overview 1 RT 1: 682-7214 bp Neighborhood of RT #1 [682, 7214] LZ_Tnp_IS481 Tra5 RVT-GII GIIM Feature: gene Location: 682-2508 bp Feature: domain Description: LZ_Tnp_IS481 Location: 748-922 bp Feature: domain Description: LZ_Tnp_IS481 Location: 748-922 bp Feature: domain Description: Tra5 Location: 925-1585 bp Feature: domain Description: Tra5 Location: 925-1 585 bp Feature: gene Location: 2522-2669 bp Feature: gene Location: 3193-4587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3457-4153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3457-41 53 bp Feature: domain Description: GIIM Note: maturase Location: 4222-4441 bp Feature: domain Description: GIIM Note: maturase Location: 4222-4441 bp Feature: gene Location: 5277-5870 bp Feature: gene Location: 5982-7214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LZ_Tnp_IS481 (pfam13011), Tra5 (COG2801)

Seq: NSFE01000025.1 Mycobacterium intracellulare strain FLAC0162 NODE_66_length_2186_cov_218.873, whole genome shotgun sequence (2186 bp)
Overview 1 RT 1: 117-2182 bp Neighborhood of RT #1 [117, 2182] RVT-GII GIIM Feature: gene Location: 117-1511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1077 bp Feature: domain Description: GIIM Note: maturase Location: 1146-1365 bp Feature: domain Description: GIIM Note: maturase Location: 1146-1365 bp Feature: gene Location: 2035-2182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NSFE01000029.1 Mycobacterium intracellulare strain FLAC0162 NODE_33_length_17888_cov_115.598, whole genome shotgun sequence (21131 bp)
Overview 1 RT 1: 117-3556 bp Neighborhood of RT #1 [117, 3702] RVT-GII GIIM Transposase_mut Feature: gene Location: 117-1511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 81-1077 bp Feature: domain Description: GIIM Note: maturase Location: 1146-1365 bp Feature: domain Description: GIIM Note: maturase Location: 1146-13 65 bp Feature: gene Location: 2035-2127 bp Feature: gene Location: 2386-3702 bp Feature: domain Description: Transposase_mut Location: 2443-3556 bp Feature: domain Description: Transposase_mut Location: 2443 -3 556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872)