myRT

myRT report for GCA_002296025.1_ASM229602v1

Download annotations/find similar RTs

Seq: DBHD01000041.1 TPA_asm: Microbacterium sp. UBA837 UBA837_contig_21203, whole genome shotgun sequence (8423 bp)
Overview 1 RT 1: 6593-8395 bp Neighborhood of RT #1 [6593, 8421] PHA02517 RVT-GII Feature: gene Location: 6593-7084 bp Feature: domain Description: PHA02517 Location: 6692-7010 bp Feature: domain Description: PHA0251 7 Location: 6692-701 0 bp Feature: gene Location: 7234-7446 bp Feature: gene Location: 7627-8421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7948-8395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7948-8395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: DBHD01000216.1 TPA_asm: Microbacterium sp. UBA837 UBA837_contig_8539, whole genome shotgun sequence (9892 bp)
Overview 1 RT 1: 3472-8881 bp Neighborhood of RT #1 [3472, 8967] his_9_HisN RVT-UG22 MFS_YfmO_like HTH_MARR Feature: gene Location: 3472-4308 bp Feature: domain Description: his_9_HisN Location: 3538-4285 bp Feature: domain Description: his_9_HisN Location: 3538-42 85 bp Feature: gene Location: 4761-5228 bp Feature: gene Location: 5266-7344 bp Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 5971-6490 bp Feature: RT Description: RVT-UG2 2 Note: UG2 2 RT Location: 5971-6490 bp Feature: gene Location: 7283-8524 bp Feature: domain Description: MFS_YfmO_like Location: 7346-8435 bp Feature: domain Description: MFS_YfmO_like Location: 7346-8435 bp Feature: gene Location: 8521-8967 bp Feature: domain Description: HTH_MARR Location: 8614-8881 bp Feature: domain Description: HTH_MARR Location: 8614-8881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_9_HisN (TIGR02067), RVT-UG22, MFS_YfmO_like (cd17474), HTH_MARR (smart00347)