myRT

myRT report for GCA_002300195.1_ASM230019v1

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Seq: NSDX01000006.1 Rhodococcus sp. ACPA1 Contig_6, whole genome shotgun sequence (756739 bp)
Overview 1 RT 1: 146862-151281 bp 2 RT 2: 564164-572625 bp Neighborhood of RT #1 [146862, 151358] GlnQ TIGR00004 RVT-Retrons FabG NfsA_FRP Neighborhood of RT #2 [564164, 572645] MFS_ShiA_like PRK07235 RVT-GII GIIM DDE_Tnp_1_4 ACAD_fadE6_17_26 Feature: gene Location: 146862-147626 bp Feature: domain Description: GlnQ Location: 146877-147621 bp Feature: domain Description: GlnQ Location: 1 46877-1 47621 bp Feature: gene Location: 147685-148068 bp Feature: domain Description: TIGR00004 Location: 147697-148054 bp Feature: domain Description: TIGR00004 Location: 1 47697-1 48054 bp Feature: gene Location: 148341-149591 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148755-149349 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 48755-1 49349 bp Feature: gene Location: 149604-150359 bp Feature: domain Description: FabG Location: 149628-150246 bp Feature: domain Description: FabG Location: 1 49628-1 50246 bp Feature: gene Location: 150531-151358 bp Feature: domain Description: NfsA_FRP Location: 150621-151281 bp Feature: domain Description: NfsA_FRP Location: 1 50621 -1 51 281 bp Feature: gene Location: 564164-565519 bp Feature: domain Description: MFS_ShiA_like Location: 564254-565469 bp Feature: domain Description: MFS_ShiA_like Location: 564254-565469 bp Feature: gene Location: 566044-567525 bp Feature: domain Description: PRK07235 Location: 566050-567256 bp Feature: domain Description: PRK07235 Location: 566050-567256 bp Feature: gene Location: 568299-569561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568515-569175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56851 5-5691 75 bp Feature: domain Description: GIIM Note: maturase Location: 569253-569472 bp Feature: domain Description: GIIM Note: maturase Location: 569253-569472 bp Feature: gene Location: 569797-571191 bp Feature: domain Description: DDE_Tnp_1_4 Location: 569839-571162 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 569839-571 1 62 bp Feature: gene Location: 571521-572645 bp Feature: domain Description: ACAD_fadE6_17_26 Location: 571542-572625 bp Feature: domain Description: ACAD_fadE6_1 7_26 Location: 571 542-572625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnQ (COG1126), TIGR00004 (reactive intermediate/imine deaminase), RVT-Retrons, FabG (COG1028), NfsA_FRP, MFS_ShiA_like (cd17369), PRK07235 (amidase; Provisional), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_4 (pfam13701)
ACAD_fadE6_17_26 (cd01152)