myRT

myRT report for GCA_002300865.1_ASM230086v1

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Seq: MNBR01000080.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000080, whole genome shotgun sequence (18352 bp)
Overview 1 RT 1: 6234-10760 bp Neighborhood of RT #1 [6234, 10780] SmpB RVT-Retrons DUF3791 DUF3990 Feature: gene Location: 6234-6689 bp Feature: domain Description: SmpB Location: 6246-6678 bp Feature: domain Description: SmpB Location: 6246-6678 bp Feature: gene Location: 7541-8422 bp Feature: gene Location: 8609-9748 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8765-9329 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8765-9329 bp Feature: gene Location: 10086-10301 bp Feature: domain Description: DUF3791 Location: 10107-10290 bp Feature: domain Description: DUF3791 Location: 1 01 07-1 0290 bp Feature: gene Location: 10301-10780 bp Feature: domain Description: DUF3990 Location: 10304-10760 bp Feature: domain Description: DUF3990 Location: 1 0304-1 0760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3791 (pfam12668), DUF3990 (pfam13151), SmpB (pfam01668), RVT-Retrons