myRT

myRT report for GCA_002306135.1_ASM230613v1

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Seq: DBRY01000007.1 TPA_asm: Pseudomonas stutzeri isolate UBA1356 UBA1356_contig_49, whole genome shotgun sequence (145639 bp)
Overview 1 RT 1: 116537-125620 bp Neighborhood of RT #1 [116537, 127425] PRK09692 RVT-UG5 nitrilase SSL2 Feature: gene Location: 116537-116842 bp Feature: gene Location: 117562-118818 bp Feature: domain Description: PRK09692 Location: 117568-118786 bp Feature: domain Description: PRK09692 Location: 1 1 7568-1 1 8786 bp Feature: gene Location: 119018-122056 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 119522-120017 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 9522-1 2001 7 bp Feature: domain Description: nitrilase Location: 121265-121955 bp Feature: domain Description: nitrilase Location: 1 21 265-1 21 955 bp Feature: gene Location: 122197-124311 bp Feature: gene Location: 124486-127425 bp Feature: domain Description: SSL2 Location: 124519-125620 bp Feature: domain Description: SSL2 Location: 1 2451 9-1 25620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424), SSL2 (COG1061)

Seq: DBRY01000022.1 TPA_asm: Pseudomonas stutzeri isolate UBA1356 UBA1356_contig_8, whole genome shotgun sequence (486661 bp)
Overview 1 RT 1: 304197-310146 bp Neighborhood of RT #1 [304197, 310157] DDE_Tnp_1 RVT-GII GIIM IS5 cztS_silS_copS Feature: gene Location: 304197-304649 bp Feature: gene Location: 304861-305283 bp Feature: domain Description: DDE_Tnp_1 Location: 304867-305233 bp Feature: domain Description: DDE_Tnp_1 Location: 304867-3052 33 bp Feature: gene Location: 305391-306659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305604-306261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305604-3062 61 bp Feature: domain Description: GIIM Note: maturase Location: 306339-306561 bp Feature: domain Description: GIIM Note: maturase Location: 306339-306561 bp Feature: gene Location: 307152-307691 bp Feature: domain Description: IS5 Location: 307341-307668 bp Feature: domain Description: IS5 Location: 307341-307668 bp Feature: gene Location: 308784-310157 bp Feature: domain Description: cztS_silS_copS Location: 308793-310146 bp Feature: domain Description: cztS_silS_copS Location: 308793-310146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), IS5 (COG3039), cztS_silS_copS (TIGR01386)