myRT

myRT report for GCA_002306555.1_ASM230655v1

Download annotations/find similar RTs

Seq: DBSO01000014.1 TPA_asm: Epsilonproteobacteria bacterium UBA1340 UBA1340_contig_32, whole genome shotgun sequence (162903 bp)
Overview 1 RT 1: 97152-106429 bp Neighborhood of RT #1 [97152, 106551] XerC COG2865 RVT-UG8 RVT-UG3 HsdM RMtype1_S_EcoKI_StySPI-TRD2-CR2_like RMtype1_S_EcoKI_StySPI-TRD2-CR2_like Feature: gene Location: 97152-98072 bp Feature: domain Description: XerC Location: 97227-97986 bp Feature: domain Description: XerC Location: 97227-97986 bp Feature: gene Location: 98245-99900 bp Feature: domain Description: COG2865 Location: 98275-99460 bp Feature: domain Description: COG2865 Location: 98275-99460 bp Feature: gene Location: 100136-102163 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 100718-101171 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 0071 8-1 01 1 71 bp Feature: gene Location: 102160-103524 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 102586-103066 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 02586-1 03066 bp Feature: gene Location: 103577-105091 bp Feature: domain Description: HsdM Location: 103622-104915 bp Feature: domain Description: HsdM Location: 1 03622-1 0491 5 bp Feature: gene Location: 105091-106551 bp Feature: domain Description: RMtype1_S_EcoKI_StySPI-TRD2-CR2_like Location: 105106-105652 bp Feature: domain Description: RMtype1 _S_EcoKI_StySPI-TRD2-CR2_like Location: 1 051 06-1 05652 bp Feature: domain Description: RMtype1_S_EcoKI_StySPI-TRD2-CR2_like Location: 105865-106429 bp Feature: domain Description: RMtype1 _S_EcoKI_StySPI-TRD2-CR2_like Location: 1 05865-1 06429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-UG8, RVT-UG3, HsdM (COG0286), RMtype1_S_EcoKI_StySPI-TRD2-CR2_like (cd17517)