myRT

myRT report for GCA_002306985.1_ASM230698v1

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Seq: DBTJ01000161.1 TPA_asm: Verrucomicrobia bacterium UBA1319 UBA1319_contig_111550, whole genome shotgun sequence (13985 bp)
Overview 1 RT 1: 2055-7306 bp Neighborhood of RT #1 [2055, 7306] DOG1 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 2055-2369 bp Feature: gene Location: 2344-2685 bp Feature: gene Location: 3260-5923 bp Feature: domain Description: DOG1 Location: 3551-3713 bp Feature: domain Description: DOG1 Location: 3551 -371 3 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4259-4856 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4259-4856 bp Feature: domain Description: Cas1_I-II-III Location: 4922-5825 bp Feature: domain Description: Cas1 _I-II-III Location: 4922-5825 bp Feature: gene Location: 6233-6643 bp Feature: domain Description: Cas2_I_II_III Location: 6269-6458 bp Feature: domain Description: Cas2_I_II_III Location: 6269-6458 bp Feature: gene Location: 6674-7306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DOG1 (pfam14144), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: DBTJ01000058.1 TPA_asm: Verrucomicrobia bacterium UBA1319 UBA1319_contig_196401, whole genome shotgun sequence (4381 bp)
Overview 1 RT 1: 3-4378 bp Neighborhood of RT #1 [3, 4378] poly_P_kin PBP2_OppA RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 3-416 bp Feature: domain Description: poly_P_kin Location: 6-306 bp Feature: domain Description: poly_P_kin Location: 6-306 bp Feature: gene Location: 506-2299 bp Feature: domain Description: PBP2_OppA Location: 776-2252 bp Feature: domain Description: PBP2 _OppA Location: 776-2 2 52 bp Feature: gene Location: 2582-3586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3158-3266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3158-32 66 bp Feature: domain Description: GIIM Note: maturase Location: 3338-3548 bp Feature: domain Description: GIIM Note: maturase Location: 3338-3548 bp Feature: gene Location: 3390-3890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3393-3504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3393-3504 bp Feature: domain Description: GIIM Note: maturase Location: 3585-3807 bp Feature: domain Description: GIIM Note: maturase Location: 3585-3807 bp Feature: gene Location: 3938-4378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT poly_P_kin (TIGR03705), PBP2_OppA (cd08504), RVT-GII, GIIM (pfam08388)