myRT

myRT report for GCA_002307035.1_ASM230703v1

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Seq: DBTL01000024.1 TPA_asm: Bacteroides sp. UBA1317 UBA1317_contig_130513, whole genome shotgun sequence (2768 bp)
Overview 1 RT 1: 729-2502 bp Neighborhood of RT #1 [729, 2502] RVT-GII KOG4768 Feature: gene Location: 729-1976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933-1590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933-1 590 bp Feature: domain Description: KOG4768 Location: 1698-1869 bp Feature: domain Description: KOG4768 Location: 1 698-1 869 bp Feature: gene Location: 2029-2211 bp Feature: gene Location: 2248-2502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: DBTL01000027.1 TPA_asm: Bacteroides sp. UBA1317 UBA1317_contig_210255, whole genome shotgun sequence (3352 bp)
Overview 1 RT 1: 1-2974 bp Neighborhood of RT #1 [1, 3351] RVT-GII RVT_N RVT-GII GIIM Feature: gene Location: 1-1092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256-946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 56-946 bp Feature: gene Location: 1509-1658 bp Feature: gene Location: 1702-3351 bp Feature: RT Description: RVT_N Location: 1759-1993 bp Feature: RT Description: RVT_N Location: 1759-1993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2038-2689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 038-2 689 bp Feature: domain Description: GIIM Note: maturase Location: 2743-2974 bp Feature: domain Description: GIIM Note: maturase Location: 2 743-2 974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), GIIM (pfam08388)

Seq: DBTL01000106.1 TPA_asm: Bacteroides sp. UBA1317 UBA1317_contig_27205, whole genome shotgun sequence (2750 bp)
Overview 1 RT 1: 2-2595 bp Neighborhood of RT #1 [2, 2612] INTN1_C_like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2-262 bp Feature: domain Description: INTN1_C_like Location: 5-245 bp Feature: domain Description: INTN1_C_like Location: 5-245 bp Feature: gene Location: 672-2612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1068-1890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1068-1890 bp Feature: domain Description: Intron_maturas2 Location: 1962-2271 bp Feature: domain Description: Intron_maturas2 Location: 1962-2271 bp Feature: domain Description: HNHc Note: nucleases Location: 2442-2595 bp Feature: domain Description: HNHc Note: nucleases Location: 2442-2595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: DBTL01000035.1 TPA_asm: Bacteroides sp. UBA1317 UBA1317_contig_315311, whole genome shotgun sequence (2882 bp)
Overview 1 RT 1: 2-2731 bp Neighborhood of RT #1 [2, 2731] Bac_Flav_CT_G RVT_N RVT-GII GIIM Feature: gene Location: 2-574 bp Feature: domain Description: Bac_Flav_CT_G Location: 113-575 bp Feature: domain Description: Bac_Flav_CT_G Location: 113-575 bp Feature: gene Location: 558-2249 bp Feature: RT Description: RVT_N Location: 627-870 bp Feature: RT Description: RVT_N Location: 627-870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915-1569 bp Feature: domain Description: GIIM Note: maturase Location: 1620-1854 bp Feature: domain Description: GIIM Note: maturase Location: 1620-1854 bp Feature: gene Location: 2540-2731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)