myRT

myRT report for GCA_002307295.1_ASM230729v1

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Seq: DBTY01000013.1 TPA_asm: Ignavibacteriales bacterium UBA1304 UBA1304_contig_1096, whole genome shotgun sequence (133465 bp)
Overview 1 RT 1: 53789-58969 bp Neighborhood of RT #1 [53789, 59187] FGE-sulfatase Avd_like RVT-DGRs rve Feature: gene Location: 53789-56050 bp Feature: domain Description: FGE-sulfatase Location: 55307-55664 bp Feature: domain Description: FGE-sulfatase Location: 55307-55664 bp Feature: gene Location: 56083-56412 bp Feature: domain Description: Avd_like Location: 56098-56404 bp Feature: domain Description: Avd_like Location: 56098-56404 bp Feature: gene Location: 56695-57741 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56905-57490 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56905-57490 bp Feature: gene Location: 57681-57998 bp Feature: gene Location: 58279-59187 bp Feature: domain Description: rve Location: 58627-58969 bp Feature: domain Description: rve Location: 58627-58969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, rve (pfam00665)

Seq: DBTY01000054.1 TPA_asm: Ignavibacteriales bacterium UBA1304 UBA1304_contig_12820, whole genome shotgun sequence (16809 bp)
Overview 1 RT 1: 13212-16544 bp Neighborhood of RT #1 [13212, 16735] FN3 FN3 FN3 FN3 Por_Secre_tail RVT-GII GIIM Feature: gene Location: 13212-14816 bp Feature: domain Description: FN3 Location: 13269-13404 bp Feature: domain Description: FN3 Location: 132 69-13404 bp Feature: domain Description: FN3 Location: 13467-13692 bp Feature: domain Description: FN3 Location: 13467-13692 bp Feature: domain Description: FN3 Location: 14019-14238 bp Feature: domain Description: FN3 Location: 14019-142 38 bp Feature: domain Description: FN3 Location: 14247-14496 bp Feature: domain Description: FN3 Location: 142 47-14496 bp Feature: domain Description: Por_Secre_tail Location: 14562-14799 bp Feature: domain Description: Por_Secre_tail Location: 14562 -14799 bp Feature: gene Location: 14923-15159 bp Feature: gene Location: 15320-16735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15683-16301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15683-16301 bp Feature: domain Description: GIIM Note: maturase Location: 16343-16544 bp Feature: domain Description: GIIM Note: maturase Location: 16343-16544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FN3 (smart00060), Por_Secre_tail (TIGR04183), RVT-GII, GIIM (pfam08388)

Seq: DBTY01000042.1 TPA_asm: Ignavibacteriales bacterium UBA1304 UBA1304_contig_1719, whole genome shotgun sequence (121749 bp)
Overview 1 RT 1: 90271-96512 bp Neighborhood of RT #1 [90271, 96512] PRK11855 aceE RVT-Retrons HTH_XRE Feature: gene Location: 90271-91956 bp Feature: domain Description: PRK11855 Location: 90274-91945 bp Feature: domain Description: PRK11855 Location: 90274-91945 bp Feature: gene Location: 92132-94810 bp Feature: domain Description: aceE Location: 92165-94805 bp Feature: domain Description: aceE Location: 92165-94805 bp Feature: gene Location: 95098-95928 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95242-95767 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95242-95767 bp Feature: gene Location: 95925-96218 bp Feature: domain Description: HTH_XRE Location: 95937-96102 bp Feature: domain Description: HTH_XRE Location: 9593 7-96102 bp Feature: gene Location: 96279-96512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11855 (dihydrolipoamide acetyltransferase; Reviewed), aceE (TIGR00759), RVT-Retrons, HTH_XRE (smart00530)