myRT

myRT report for GCA_002307565.1_ASM230756v1

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Seq: NTMU01000051.1 Escherichia coli strain N60559 N60559_contig_51, whole genome shotgun sequence (9293 bp)
Overview 1 RT 1: 614-3453 bp Neighborhood of RT #1 [614, 3458] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 614-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881-1712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881 -1 71 2 bp Feature: domain Description: Intron_maturas2 Location: 1826-2084 bp Feature: domain Description: Intron_maturas2 Location: 1 826-2084 bp Feature: domain Description: HNHc Note: nucleases Location: 2258-2420 bp Feature: domain Description: HNHc Note: nucleases Location: 2258-2420 bp Feature: gene Location: 2665-3162 bp Feature: domain Description: PRK13732 Location: 2668-3160 bp Feature: domain Description: PRK1 3732 Location: 2668-31 60 bp Feature: gene Location: 3225-3458 bp Feature: domain Description: DUF905 Location: 3255-3453 bp Feature: domain Description: DUF905 Location: 3255-3453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NTMU01000035.1 Escherichia coli strain N60559 N60559_contig_35, whole genome shotgun sequence (76700 bp)
Overview 1 RT 1: 21661-25540 bp Neighborhood of RT #1 [21661, 25545] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 21661-22377 bp Feature: domain Description: rph Location: 21664-22372 bp Feature: domain Description: rph Location: 2 1664-2 2 372 bp Feature: gene Location: 22443-23084 bp Feature: domain Description: pyrE Location: 22446-23079 bp Feature: domain Description: pyrE Location: 2 2 446-2 3079 bp Feature: gene Location: 23382-24341 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23517-24066 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 3517-2 4066 bp Feature: gene Location: 24387-24983 bp Feature: domain Description: slmA Location: 24393-24969 bp Feature: domain Description: slmA Location: 2 4393-2 4969 bp Feature: gene Location: 25090-25545 bp Feature: domain Description: dut Location: 25093-25540 bp Feature: domain Description: dut Location: 2 5093-2 5540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)