myRT

myRT report for GCA_002309425.1_ASM230942v1

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Seq: DBXD01000096.1 TPA_asm: Cyanobacteria bacterium UBA1221 UBA1221_contig_162590, whole genome shotgun sequence (22933 bp)
Overview 1 RT 1: 19012-22431 bp Neighborhood of RT #1 [19012, 22721] SpoVK SpoVK DnaB RVT-Retrons Feature: gene Location: 19012-20994 bp Feature: domain Description: SpoVK Location: 19702-20137 bp Feature: domain Description: SpoVK Location: 1 9702-201 37 bp Feature: domain Description: SpoVK Location: 20272-20770 bp Feature: domain Description: SpoVK Location: 20272-20770 bp Feature: gene Location: 21031-21852 bp Feature: domain Description: DnaB Location: 21052-21826 bp Feature: domain Description: DnaB Location: 21 052-21 826 bp Feature: gene Location: 21870-22721 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21918-22431 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 91 8-22431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVK (COG0464), DnaB (TIGR00665), RVT-Retrons

Seq: DBXD01000078.1 TPA_asm: Cyanobacteria bacterium UBA1221 UBA1221_contig_16758, whole genome shotgun sequence (41941 bp)
Overview 1 RT 1: 30372-35272 bp Neighborhood of RT #1 [30372, 35871] PadR GT9_LPS_heptosyltransferase RVT-Retrons DnaB PDDEXK_4 Feature: gene Location: 30372-30896 bp Feature: domain Description: PadR Location: 30375-30666 bp Feature: domain Description: PadR Location: 30375-30666 bp Feature: gene Location: 30955-32685 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 32386-32626 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 32 386-32 62 6 bp Feature: gene Location: 32860-33720 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32917-33442 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 917-33442 bp Feature: gene Location: 33730-34581 bp Feature: domain Description: DnaB Location: 33781-34561 bp Feature: domain Description: DnaB Location: 33781-34561 bp Feature: gene Location: 34765-35871 bp Feature: domain Description: PDDEXK_4 Location: 34840-35272 bp Feature: domain Description: PDDEXK_4 Location: 34840-352 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), GT9_LPS_heptosyltransferase (cd03789), RVT-Retrons, DnaB (TIGR00665), PDDEXK_4 (pfam14281)